prot_H-canaliculatus_F_contig1278.2311.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1278.2311.1
Unique Nameprot_H-canaliculatus_F_contig1278.2311.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length327
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1278.2311.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 503 bits (1295), Expect = 2.250e-177
Identity = 251/328 (76.52%), Postives = 285/328 (86.89%), Query Frame = 0 
Query:    1 MELDH-GTGTASKRHREQAARKVVMVVGMPAAGKSNLANKLLNHPTWDAFEEGDGTYGSTVETQRAEWSDMVVIDTPGIPAHDQQTTLANFDAVIEVLRREGSLSTLIFLVQQEEVSPVEFRDYAILLKQFNHLPCSKLVVCRQVALSRRHKRTEEERRHAGAQFVEHVLEDSGLSMPLVLLNDGYGSESFKQIDEIRRFVRRSERAPVHL-ASLRTSSELRSFTARLADPSTRLRALEEEVEELEVSLWHRSLWMACQVVPLAYISVSSPGAGCLWTGPYVKREQEAFAELRMELNDKKGEIESNKVHQEELSAAKGVSAYLNYMCS 326
            ++++H   G  S   R Q A KVVMV+GMP AGKSNLANKLLNHPTWDAFEEGDGTYGST ETQR EW+D+VVIDTPG P HD +TT  NFDA+++ LRREGSLSTLIFLVQQEEVSP EFRDYA+LL+Q NHLPCSKL+VCRQ ALSRRHKRTEEERRH+GAQFVE VL+DSGL+MPLVLLNDGYGSES KQ+DEIRRFV RSERA + L ASLRT +ELRSF A+LADP++RLR + EEVE++E SLWHRSLWMACQVVPLAYISVSSPGAGC+WTGPYVKREQEA A LR ELNDKK EIE + V ++EL AA+GV A+L+YMC+
Sbjct:   13 LDVEHQSAGAGSNGRRRQEAPKVVMVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQAALSRRHKRTEEERRHSGAQFVEGVLDDSGLNMPLVLLNDGYGSESIKQVDEIRRFVGRSERARLDLVASLRTFAELRSFAAKLADPASRLRTVREEVEQMEASLWHRSLWMACQVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELRAAQGVLAFLDYMCA 340
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BLAST of mRNA_H-canaliculatus_F_contig1278.2311.1 vs. uniprot
Match: D8LN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN49_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 7.700e-84
Identity = 133/171 (77.78%), Postives = 151/171 (88.30%), Query Frame = 0 
Query:  157 RRHAGAQFVEHVLEDSGLSMPLVLLNDGYGSESFKQIDEIRRFVRRSERAPVH-LASLRTSSELRSFTARLADPSTRLRALEEEVEELEVSLWHRSLWMACQVVPLAYISVSSPGAGCLWTGPYVKREQEAFAELRMELNDKKGEIESNKVHQEELSAAKGVSAYLNYMCS 326
            +RHAGAQFVE VLEDSGL+MPLVLLNDGYGSESFKQ+DEIRRFV RSERA +  LAS RT +ELRSF A+LADP++RLR L EEVE++E SLWHRSLWMAC VVPLAYISVSSPGAGC+WTGPYVKREQEA A LR ELNDKK EIE + V ++EL AA+GVSA+L+YMC+
Sbjct:   26 KRHAGAQFVEGVLEDSGLNMPLVLLNDGYGSESFKQVDEIRRFVGRSERARLDPLASPRTFAELRSFAAKLADPASRLRTLREEVEQMEASLWHRSLWMACHVVPLAYISVSSPGAGCIWTGPYVKREQEACARLRKELNDKKEEIELDIVDEQELCAAQGVSAFLDYMCA 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1278.2311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE2.250e-17776.52G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D8LN49_ECTSI7.700e-8477.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..300
NoneNo IPR availableGENE3D3.40.50.300coord: 5..228
e-value: 4.5E-10
score: 41.2
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 23..118
e-value: 7.3E-9
score: 35.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1278contigH-canaliculatus_F_contig1278:3293..5266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1278.2311.1mRNA_H-canaliculatus_F_contig1278.2311.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1278 1443..6805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1278.2311.1 ID=prot_H-canaliculatus_F_contig1278.2311.1|Name=mRNA_H-canaliculatus_F_contig1278.2311.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=327bp
MELDHGTGTASKRHREQAARKVVMVVGMPAAGKSNLANKLLNHPTWDAFE
EGDGTYGSTVETQRAEWSDMVVIDTPGIPAHDQQTTLANFDAVIEVLRRE
GSLSTLIFLVQQEEVSPVEFRDYAILLKQFNHLPCSKLVVCRQVALSRRH
KRTEEERRHAGAQFVEHVLEDSGLSMPLVLLNDGYGSESFKQIDEIRRFV
RRSERAPVHLASLRTSSELRSFTARLADPSTRLRALEEEVEELEVSLWHR
SLWMACQVVPLAYISVSSPGAGCLWTGPYVKREQEAFAELRMELNDKKGE
IESNKVHQEELSAAKGVSAYLNYMCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006073GTP_binding_domain