prot_H-canaliculatus_F_contig12774.2307.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12774.2307.1
Unique Nameprot_H-canaliculatus_F_contig12774.2307.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length88
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12774.2307.1 vs. uniprot
Match: A0A6H5KS32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS32_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 8.090e-17
Identity = 43/49 (87.76%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   36 PGAEGVEEEAKEQQDDLELIARCFPEDLLLAVEALPSTIDALAELPGES 84
            PG E VEEEAKEQQDDLELIA+CFPEDLLLAVEALPSTIDALAE P  S
Sbjct: 1736 PGTEAVEEEAKEQQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQAS 1784
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BLAST of mRNA_H-canaliculatus_F_contig12774.2307.1 vs. uniprot
Match: D8LU39_ECTSI (E3 ubiquitin-protein ligase listerin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU39_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.370e-10
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:   48 QQDDLELIARCFPEDLLLAVEALPSTIDALAELPGES 84
            QQDDLELIA+CFPEDLLLAVEALPSTIDALAE P  S
Sbjct: 1690 QQDDLELIAKCFPEDLLLAVEALPSTIDALAEAPQAS 1726
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12774.2307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS32_9PHAE8.090e-1787.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU39_ECTSI1.370e-1089.19E3 ubiquitin-protein ligase listerin n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12774contigH-canaliculatus_F_contig12774:168..953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12774.2307.1mRNA_H-canaliculatus_F_contig12774.2307.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12774 168..957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12774.2307.1 ID=prot_H-canaliculatus_F_contig12774.2307.1|Name=mRNA_H-canaliculatus_F_contig12774.2307.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=88bp
MGAEGGGAGEGGDGGDDAGGAGGEAAGEGGDQRDLPGAEGVEEEAKEQQD
DLELIARCFPEDLLLAVEALPSTIDALAELPGESGDSA
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