prot_H-canaliculatus_F_contig1272.2269.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1272.2269.1
Unique Nameprot_H-canaliculatus_F_contig1272.2269.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length279
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1272.2269.1 vs. uniprot
Match: D7FYW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYW2_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.440e-124
Identity = 200/277 (72.20%), Postives = 222/277 (80.14%), Query Frame = 0 
Query:    1 MKLSAVPNAALALGFFCHVDSFVVAPLPAG-QHRQISCTSFLSSHMIPSSGGGSRSSHAGKSSSGVVMMGGFGEPVKKKKPVGVGRGQEAYQRQMKSYNGLRGAGAEGVDVYVHREGDDKFIFAGKAAWSTGITAKQALQFQRGLILGHVELLEPRWKDNPAPMRIFTAPLDSEVEVARNMHDLVRVLGPGKGKDVKVDGLTPQEVGLKPELYELGEDYFYVRKLDDGKSPAPPADVMIESMEDLVAKGVVPGKVEGAGEAAAAATEAKEAVTPPPA 276
            MK+SAVP+AA+ALG  C VDSF  APL AG Q RQ S       HMIPS  G  RS+    +SS V+MMGGFG P KKKK VGVGRGQ+AYQRQ+KSY+GL  AGAEG DVYVHREGDDKFIF GKAAWS+GIT +QALQFQRGLILGHVELLEP WKD PAPMRIFTAP++SE+EVARN+HDLVRVLGPGKGKDVKVD LTPQEVGL+PELYELGE YFYVRKLDDGK PAPP++VMIE+M++LVAKGVVP K            E  +A  PPPA
Sbjct:    1 MKISAVPSAAIALGLLCDVDSF--APLTAGWQLRQTSSAW----HMIPS--GRPRSA----TSSRVMMMGGFGGPEKKKKVVGVGRGQDAYQRQVKSYHGLTEAGAEGADVYVHREGDDKFIFMGKAAWSSGITVQQALQFQRGLILGHVELLEPMWKDKPAPMRIFTAPINSEIEVARNIHDLVRVLGPGKGKDVKVDKLTPQEVGLRPELYELGEPYFYVRKLDDGKCPAPPSEVMIETMDNLVAKGVVPAK------------ETVDAAAPPPA 253
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1272.2269.1 vs. uniprot
Match: A0A7S2A9K5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9K5_TRICV)

HSP 1 Score: 54.7 bits (130), Expect = 5.220e-5
Identity = 50/171 (29.24%), Postives = 84/171 (49.12%), Query Frame = 0 
Query:   92 RQMKSYNGLRGAGAEGV--DVYVHREGDDKFIFAGKAAWSTGITAKQALQFQRGLILGHVELLEPRWKDNP--APMRIFTAPLDSEVEVARNMHDLVRVLGPGKGKDVK-VDGLTPQEVGLKPELYELGEDYFYVRKLDDG-------KSPAP-----PADVMIESMEDLV 245
            RQ  ++  +R AG   +  DVY      D F F GK A  + ++ + A+  Q  LI  H   L  R++  P    + ++TAP DSE++VA N  +L + +   +  DV+    +   EVG + E+Y+ GE+ F   + +DG       K+P       P D  +E +++L+
Sbjct:  119 RQNNNFVAIREAGGPELTNDVYARDPSTDVFFFVGKCARVSDVSVRAAVARQWPLIEEHACRLR-RFELFPKRGTVELWTAPGDSELDVAYNRPEL-KFVKMDRTDDVEGARDVKSAEVGFQGEIYDQGEEGFRTWRTEDGSPKRDEIKAPEKGPKRAPTDEELEEIQELL 287
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1272.2269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYW2_ECTSI1.440e-12472.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2A9K5_TRICV5.220e-529.24Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..278
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1272contigH-canaliculatus_F_contig1272:11917..14476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1272.2269.1mRNA_H-canaliculatus_F_contig1272.2269.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1272 11888..15359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1272.2269.1 ID=prot_H-canaliculatus_F_contig1272.2269.1|Name=mRNA_H-canaliculatus_F_contig1272.2269.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=279bp
MKLSAVPNAALALGFFCHVDSFVVAPLPAGQHRQISCTSFLSSHMIPSSG
GGSRSSHAGKSSSGVVMMGGFGEPVKKKKPVGVGRGQEAYQRQMKSYNGL
RGAGAEGVDVYVHREGDDKFIFAGKAAWSTGITAKQALQFQRGLILGHVE
LLEPRWKDNPAPMRIFTAPLDSEVEVARNMHDLVRVLGPGKGKDVKVDGL
TPQEVGLKPELYELGEDYFYVRKLDDGKSPAPPADVMIESMEDLVAKGVV
PGKVEGAGEAAAAATEAKEAVTPPPAAE*
back to top