prot_H-canaliculatus_F_contig12709.2260.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12709.2260.1
Unique Name	prot_H-canaliculatus_F_contig12709.2260.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	138

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A6H5KFS2_9PHAE (DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFS2_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 3.420e-83
Identity = 129/138 (93.48%), Postives = 135/138 (97.83%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+DAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADR AGKHYRQVFRNNMQEK+ PEIDCDY+G DFTCITFTPDWKRFHMTGME+DTIALLRK
Sbjct:   50 LKVTLDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRDAGKHYRQVFRNNMQEKQAPEIDCDYEGPDFTCITFTPDWKRFHMTGMESDTIALLRK 187

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A7S3XY05_HETAK (DNA topoisomerase 2 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY05_HETAK)

HSP 1 Score: 201 bits (512), Expect = 1.290e-60
Identity = 94/139 (67.63%), Postives = 116/139 (83.45%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEI-DCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            +QVT++  +G+ISVWNDG+GIP+ +HKEH+IYVPELIFG+LLTGSNFDDD+KKT GGRNG+GAKL NI+S+EFVVETAD   GK +R+VFRNNMQE +  E+ D D DG DFTCITFTPD +RFH+  M+ D + LL K
Sbjct:   64 IQVTIEQGAGRISVWNDGSGIPVVVHKEHNIYVPELIFGHLLTGSNFDDDEKKTVGGRNGYGAKLTNIFSSEFVVETADGAHGKRFRKVFRNNMQESDPAEVEDYDGDGEDFTCITFTPDLRRFHLDRMDDDFVGLLMK 202

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A835YRC0_9STRA (DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.140e-57
Identity = 98/138 (71.01%), Postives = 113/138 (81.88%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VTVD  +G ISVWN+G GIPI  H EH  Y+PELIFG+LLTGSNF+D +KKTTGGRNG+GAKLANI+STEFVVETAD    K YRQVFRNNM +K+EP I  DYDG +FTCITF PDW+RF M GME DT ALL+K
Sbjct:   46 LKVTVDKAAGSISVWNNGRGIPIARHAEHGCYIPELIFGHLLTGSNFNDQEKKTTGGRNGYGAKLANIFSTEFVVETADGATRKRYRQVFRNNMGDKDEPVIK-DYDGDEFTCITFKPDWRRFGMAGMEDDTEALLQK 182

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A1V9ZH33_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZH33_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.140e-56
Identity = 94/138 (68.12%), Postives = 115/138 (83.33%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT D E+G ISVWN+G GIP+  HKEH +YVPELIFG+LLTGSNFDD++KKTTGGRNG+GAKLANI+STEF+VETA+R  GK YRQVF+ NM  KEEP+I   +   DFTCITFTPD+ RF MTG+++D IAL +K
Sbjct:  108 LKVTFDQETGAISVWNNGRGIPVVEHKEHKVYVPELIFGHLLTGSNFDDNKKKTTGGRNGYGAKLANIFSTEFIVETANREDGKRYRQVFKKNMSVKEEPKI-TSWSKKDFTCITFTPDFTRFQMTGLDSDIIALFKK 244

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A397CXW9_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CXW9_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.080e-56
Identity = 93/138 (67.39%), Postives = 114/138 (82.61%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+D+E G+ISVWN+G GIP+ MHKEH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EFVVETA R  GK YRQVF +NM  K  P+I   +   DFTCITFTPD+KRF MTG++ D +AL +K
Sbjct:  297 LKVTIDSEKGEISVWNNGNGIPVVMHKEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFVVETASREQGKRYRQVFSDNMSVKGAPKI-TSWSKKDFTCITFTPDFKRFQMTGLDDDIVALFKK 433

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A1V9Z4P5_9STRA (DNA topoisomerase 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4P5_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.850e-56
Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT D E+G ISVWN+G GIP+ +HKEH++YVPELIFG+LLTGSNFDD++KKTTGGRNG+GAKLANI+STEF+VETA +  GK YRQVF NNM EK EP+I   +   DFTCITFTPD+ RF MTG++ D I+L +K
Sbjct:  114 LKVTFDQETGAISVWNNGRGIPVVLHKEHNVYVPELIFGHLLTGSNFDDNKKKTTGGRNGYGAKLANIFSTEFIVETASKEDGKRYRQVFTNNMGEKGEPKITA-WSKKDFTCITFTPDFARFQMTGLDDDIISLFKK 250

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: W4H243_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H243_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.280e-56
Identity = 93/138 (67.39%), Postives = 114/138 (82.61%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+D+E G+ISVWN+G GIP+ MHKEH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EFVVETA R  GK YRQVF +NM  K  P+I   +   DFTCITFTPD+KRF MTG++ D +AL +K
Sbjct:  104 LKVTIDSEKGEISVWNNGNGIPVVMHKEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFVVETASREQGKRYRQVFSDNMSVKGAPKI-TSWSKKDFTCITFTPDFKRFQMTGLDDDIVALFKK 240

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A397FYY6_9STRA (DNA topoisomerase 2 n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FYY6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.340e-56
Identity = 93/138 (67.39%), Postives = 114/138 (82.61%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+D+E G+ISVWN+G GIP+ MHKEH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EFVVETA R  GK YRQVF +NM  K  P+I   +   DFTCITFTPD+KRF MTG++ D +AL +K
Sbjct:  408 LKVTIDSEKGEISVWNNGNGIPVVMHKEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFVVETASREQGKRYRQVFSDNMSVKGAPKI-TSWSKKDFTCITFTPDFKRFQMTGLDDDIVALFKK 544

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A3R6Z1T3_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z1T3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 7.170e-56
Identity = 92/138 (66.67%), Postives = 114/138 (82.61%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+DAE G+ISVWN+G GIP+ MH+EH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EF+VETA R  GK YRQVF NNM  K  P+I   +   DFTCITFTPD++RF MTG++ D +AL +K
Sbjct:  377 LKVTIDAEKGEISVWNNGNGIPVVMHQEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFIVETASREQGKRYRQVFSNNMSVKGAPKI-TSWSKKDFTCITFTPDFERFQMTGLDDDIVALFKK 513

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BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Match: A0A024UPN1_9STRA (DNA topoisomerase 2 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPN1_9STRA)

HSP 1 Score: 197 bits (501), Expect = 7.220e-56
Identity = 92/138 (66.67%), Postives = 114/138 (82.61%), Query Frame = 0

Query:    1 VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEPEIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK 138
            ++VT+DAE G+ISVWN+G GIP+ MH+EH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EF+VETA R  GK YRQVF NNM  K  P+I   +   DFTCITFTPD++RF MTG++ D +AL +K
Sbjct:   94 LKVTIDAEKGEISVWNNGNGIPVVMHQEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFIVETASREQGKRYRQVFSNNMSVKGAPKI-TSWSKKDFTCITFTPDFERFQMTGLDDDIVALFKK 230

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12709.2260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KFS2_9PHAE	3.420e-83	93.48	DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A7S3XY05_HETAK	1.290e-60	67.63	DNA topoisomerase 2 (Fragment) n=1 Tax=Heterosigma...	[more]
A0A835YRC0_9STRA	1.140e-57	71.01	DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=...	[more]
A0A1V9ZH33_9STRA	1.140e-56	68.12	DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thraus...	[more]
A0A397CXW9_9STRA	2.080e-56	67.39	DNA topoisomerase 2 n=1 Tax=Aphanomyces astaci Tax...	[more]
A0A1V9Z4P5_9STRA	2.850e-56	67.39	DNA topoisomerase 2 n=1 Tax=Achlya hypogyna TaxID=...	[more]
W4H243_9STRA	5.280e-56	67.39	DNA topoisomerase 2 n=1 Tax=Aphanomyces astaci Tax...	[more]
A0A397FYY6_9STRA	5.340e-56	67.39	DNA topoisomerase 2 n=12 Tax=Aphanomyces astaci Ta...	[more]
A0A3R6Z1T3_9STRA	7.170e-56	66.67	DNA topoisomerase 2 n=1 Tax=Aphanomyces invadans T...	[more]
A0A024UPN1_9STRA	7.220e-56	66.67	DNA topoisomerase 2 n=2 Tax=Aphanomyces invadans T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 13..26 score: 50.7 coord: 56..70 score: 56.26
None	No IPR available	PANTHER	PTHR10169	DNA TOPOISOMERASE/GYRASE	coord: 2..138
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	3.30.565.10		coord: 1..138 e-value: 4.7E-55 score: 188.7
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	SUPERFAMILY	55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 1..136
IPR003594	Histidine kinase/HSP90-like ATPase	PFAM	PF02518	HATPase_c	coord: 2..112 e-value: 3.9E-9 score: 37.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12709	contig	H-canaliculatus_F_contig12709:120..1251 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12709.2260.1	mRNA_H-canaliculatus_F_contig12709.2260.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12709 120..1251 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12709.2260.1 ID=prot_H-canaliculatus_F_contig12709.2260.1|Name=mRNA_H-canaliculatus_F_contig12709.2260.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=138bp
VQVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLLTGSNFDDD
QKKTTGGRNGFGAKLANIYSTEFVVETADRRAGKHYRQVFRNNMQEKEEP
EIDCDYDGTDFTCITFTPDWKRFHMTGMEADTIALLRK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003594	HATPase_C
IPR036890	HATPase_C_sf