prot_H-canaliculatus_F_contig12707.2259.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12707.2259.1
Unique Nameprot_H-canaliculatus_F_contig12707.2259.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length180
Homology
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 3.530e-92
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0
Query:    1 MANFEDGMPTPYIRPDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLKAKKXXXXXXXXXXXXXXXXXXXXXXXXVKKKGKKKGKR 179
            MANFEDGMPTPYI PDKN+LYV+P EALR MDVSKLIVIWPNNVDSTRTIK+GRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWV+GRVRVRL DEDGVPWNPEVPDRPSLMKKMGELMPNLKSR DR+ KAKK      XXXXXXXXXXXXXXXXXX    GKKKGKR
Sbjct:   25 MANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.160e-36
Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 0
Query:    1 MANFEDGMPTPYIRPDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLKAKK 144
            M + +  +P P   PDK   Y+ P + +  +D SK IV+WPN +D  +TI +GRR+ K   C  P V ++  + +   LW+A+EP+K YPREP+V+GRVRVR+   DG P +P++PD+ +L+KKMG L+PNL  RKDRLL+  K
Sbjct:    8 MEDEQQELPPP---PDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRLLQMSK 147          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.100e-32
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 0
Query:    1 MANFEDGMPTPYIR--PDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLKAKK 144
            +A    G    Y R  P+ NT    PP     +D +K I +WP+N++S RT+ KGRR+P +  C  P V +MS+VL+F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGEL+P LK R  R+  AK+
Sbjct:   21 VAEIPPGEEMYYTREMPNPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRMEMAKR 166          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 122 bits (306), Expect = 4.130e-31
Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 0
Query:    5 EDGMPTPYIRPDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRL 139
            +D  P P    DKN  +  P    +  D S+ I +WPNN++S +T+K+GRRI K   C  P VEDMS+V ++LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R +L+ +MG L+P L +R+ RL
Sbjct:   83 DDAPPLPSFN-DKNASFYWPYN--QQSDYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRL 214          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.210e-28
Identity = 59/127 (46.46%), Postives = 81/127 (63.78%), Query Frame = 0
Query:   13 IRPDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRL 139
            + PD NT    P      +D S+ +VIW  N++ +  + +GRRIP AS C  P V +MS+VL+  +L H +EP+K YPR   V GRVRV+L+D++  P NPEVP R  LM +MGEL+P LK R  R+
Sbjct:   36 VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRV-MVPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRI 161          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A8J5IME7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IME7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.390e-28
Identity = 54/112 (48.21%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   30 GMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLK 141
            G   S  +  +PN +D+ +T+++GRRIPK + C +P  ++MS+V  + +L H +EP K YPR+  V GR+RVRLV +DG P NP++P+R +LM KM EL+P L+SRK RL K
Sbjct:   50 GTPTSSFMTFYPNYIDNKKTVQQGRRIPKQNACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLVRDDGSPENPDIPNRKTLMIKMAELIPKLQSRKVRLEK 161          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: M4BW27_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW27_HYAAE)

HSP 1 Score: 111 bits (278), Expect = 1.250e-27
Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   30 GMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLK 141
            G   S     +PN +DS RT+++GRRIPK+  C +P  ++MS+V  FL+L H +EP K YPR+  V GR+RVRLV EDG   NPE+P+R +L+ KM +L+P L+SRK RL K
Sbjct:   48 GSPTSMFYTFYPNYLDSKRTVQQGRRIPKSMACEAPIADEMSEVCTFLKLPHVLEPTKKYPRDWLVAGRIRVRLVREDGSLENPELPNRKALILKMADLIPKLQSRKVRLEK 159          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A6A3TTV6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TTV6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.910e-27
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   30 GMDVSKLIVIWPNNVDSTRTIKKGRRIPKASG--CPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRL 139
            G   + L+  +PN +DS +T+++GRRIP+A    C +P  ++MS+V  +L+L H +EP K YPR+  V GRVRVRLV +DG P NPEVP R +LM KM EL+P L+SRK RL
Sbjct:  118 GAPTASLMTFYPNYIDSKKTVQQGRRIPQAQAQACETPLADEMSEVCTYLKLPHVLEPAKKYPRDWLVSGRVRVRLVRDDGSPENPEVPTRKALMVKMAELIPKLQSRKLRL 229          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: A0A1V9ZNX3_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNX3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.780e-26
Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 0
Query:   30 GMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRL 139
            G D  +    +PN +DS +T   GRRIPKA  C  P VE+M++V  + +L H +EP+KAY RE  V GRVRV+L D +G P N +V  R  LM KMGEL+P L+ RKDRL
Sbjct:  140 GTDFKRWATFYPNYIDSDKTNAMGRRIPKAMACDRPIVEEMAEVCRYFKLDHVIEPHKAYSRESLVAGRVRVKLTDANGKPCNSDVRTRKELMLKMGELIPKLQLRKDRL 249          
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Match: D0MUF1_PHYIT (Transmembrane protein, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MUF1_PHYIT)

HSP 1 Score: 110 bits (274), Expect = 2.930e-26
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 0
Query:   30 GMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLK 141
            G   S  +  +PN +D  +T+++GRRIPK S C +P  ++MS+V  + +L H +EP K YPR+  V GR+RVRL+ +DG P N ++P+R +LM KM EL+P L+SRK RL K
Sbjct:  125 GTPTSTFMTFYPNYIDDKKTVQQGRRIPKLSACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLLRDDGTPENADIPNRKTLMIKMAELIPKLQSRKVRLEK 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12707.2259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI3.530e-9288.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA2.160e-3645.83Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA1.100e-3245.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK4.130e-3146.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SLH7_9STRA1.210e-2846.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5IME7_9STRA3.390e-2848.21Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
M4BW27_HYAAE1.250e-2750.89Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A3TTV6_9STRA4.910e-2751.79Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A1V9ZNX3_9STRA2.780e-2650.91Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]
D0MUF1_PHYIT2.930e-2647.32Transmembrane protein, putative n=13 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..163
NoneNo IPR availablePANTHERPTHR17453:SF0SIGNAL RECOGNITION PARTICLE 19 KDA PROTEINcoord: 29..178
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3D3.30.56.30coord: 26..147
e-value: 2.7E-31
score: 110.3
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILY69695SRP19coord: 29..134
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 38..130
e-value: 5.6E-23
score: 81.7
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 29..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12707contigH-canaliculatus_F_contig12707:1112..3398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12707.2259.1mRNA_H-canaliculatus_F_contig12707.2259.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12707 1109..3398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12707.2259.1 ID=prot_H-canaliculatus_F_contig12707.2259.1|Name=mRNA_H-canaliculatus_F_contig12707.2259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=180bp
MANFEDGMPTPYIRPDKNTLYVKPPEALRGMDVSKLIVIWPNNVDSTRTI
KKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVMGRVR
VRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRKDRLLKAKKEKEAEA
RAEKEKAAAAIAAASQANVKKKGKKKGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002778Signal_recog_particle_SRP19
IPR036521SRP19-like_sf