prot_H-canaliculatus_F_contig12700.2254.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12700.2254.1
Unique Nameprot_H-canaliculatus_F_contig12700.2254.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length165
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12700.2254.1 vs. uniprot
Match: A0A6H5JHJ8_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.400e-32
Identity = 69/100 (69.00%), Postives = 79/100 (79.00%), Query Frame = 0 
Query:   34 AMSLLKHIYALQAPQSSPWDRPMLRALSTHQVGAGGGDLAVTYYVYTSRLLFELIADPAISGLMKGLQPVAHVTPPAVLEEQPVQFISNRPSFLRPTSAA 133
            A  LL+H+YALQ   SSPW RPMLRALSTH     G  LAVTY++YTSRLLFELIADPAISG+MK L+PVA VTPPAV+EEQPVQF+S RP   R  +A+
Sbjct:  187 AADLLQHVYALQ---SSPWKRPMLRALSTHVPTDYG--LAVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGVRRTPAAS 281
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BLAST of mRNA_H-canaliculatus_F_contig12700.2254.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.620e-30
Identity = 74/117 (63.25%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:   27 EGRGRGRAMSLLKHIYAL----------QAPQSSPWDRPMLRALSTHQVGAGGGDLAVTYYVYTSRLLFELIADPAISGLMKGLQPVAHVTPPAVLEEQPVQFISNRPSFLRPTSAA 133
            +GRGR  A + L+   A           Q+PQSSPW RPMLRALSTH V A  G L VTY++YTSRLLFELIADPAISG+MK L+PVA VTPPAV+E+QPVQF+S RP  LR T AA
Sbjct:   50 DGRGRRPAATHLRSPAARSARVDDRHGPQSPQSSPWKRPMLRALSTH-VSAEDG-LTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEKQPVQFVSTRPG-LRRTPAA 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12700.2254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHJ8_9PHAE1.400e-3269.00SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
D7G2K8_ECTSI1.620e-3063.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12700contigH-canaliculatus_F_contig12700:418..2438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12700.2254.1mRNA_H-canaliculatus_F_contig12700.2254.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12700 418..2438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12700.2254.1 ID=prot_H-canaliculatus_F_contig12700.2254.1|Name=mRNA_H-canaliculatus_F_contig12700.2254.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=165bp
MNGSSAGDGATSRSRSDEGWTPGYLPEGRGRGRAMSLLKHIYALQAPQSS
PWDRPMLRALSTHQVGAGGGDLAVTYYVYTSRLLFELIADPAISGLMKGL
QPVAHVTPPAVLEEQPVQFISNRPSFLRPTSAASTTAATAAPPCRSSNNN
GSSAASTEGCLSRTG
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