prot_H-canaliculatus_F_contig12696.2244.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12696.2244.1
Unique Nameprot_H-canaliculatus_F_contig12696.2244.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length238
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12696.2244.1 vs. uniprot
Match: D7FTH2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH2_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.970e-5
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    1 SFGVDGSKKRDFCSQHKEDAMVSVVNKRCRHSSCSK 36
            SFG DGSKK +FCSQH++  MV VV ++C H  C+K
Sbjct:    5 SFGTDGSKKAEFCSQHRQQGMVDVVTRKCGHPGCTK 40
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12696.2244.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.200e-5
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    1 SFGVDGSKKRDFCSQHKEDAMVSVVNKRCRHSSCSKTAIFG 41
            S+G+DGSKK +FCS+H +  M +V  KRC H+ C K   +G
Sbjct:   41 SYGIDGSKKAEFCSKHSKPGMTNVTKKRCGHAGCIKQPSYG 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12696.2244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTH2_ECTSI1.970e-558.33EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FY22_ECTSI5.200e-548.78EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12696contigH-canaliculatus_F_contig12696:1858..3096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12696.2244.1mRNA_H-canaliculatus_F_contig12696.2244.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12696 1858..3096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12696.2244.1 ID=prot_H-canaliculatus_F_contig12696.2244.1|Name=mRNA_H-canaliculatus_F_contig12696.2244.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=238bp
SFGVDGSKKRDFCSQHKEDAMVSVVNKRCRHSSCSKTAIFGADGGKKEFC
SQHKKDGMVTFVNSRCSHSSCSKTASFGVDGSRKREFCVQHKKDGMVRVY
KYKQPPSKTSKRKRVAREQNNGCSESGGCSDSDSGIVSRRRKWSSFQSSD
SDSVSKSNASDEDCEAKQKNLTLSLADPIVFFNHTSASDKRNIRSHPRAP
SQHQQTPWRQLRVLLLPLLRRREVWTATPWPMATIFF*
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