prot_H-canaliculatus_F_contig12690.2238.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12690.2238.1
Unique Nameprot_H-canaliculatus_F_contig12690.2238.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length195
Homology
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 5.700e-36
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 0
Query:   35 SKNLRKTEAELTVALASLDPEIRGRLSGLVKPDELDPFEVRALGKFDVADALDILDRFAEADLRKVRNRSGFLAGIMRKHGSAA 118
            SKNLRKTEAEL   +A+LD ++RGRLS LVKPDELDPFEVRALGKFD ADALDILDRFAEADLR+VRNRSGFLAGIMRKHGSA+
Sbjct:  987 SKNLRKTEAELAATVAALDADVRGRLSELVKPDELDPFEVRALGKFDTADALDILDRFAEADLRRVRNRSGFLAGIMRKHGSAS 1070          
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.320e-13
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
Query:   48 ALASLDPEIRGRL-----SGLVKPDELDPFEVRALGKFDVADALDILDRFAEADLRKVRNRSGFLAGIMRKHGS 116
            AL +L  E+R  +       L+K  ELD FE+RAL +F+  DAL IL+RFAEADLRKV N+SGFLAGIMRK+GS
Sbjct: 1089 ALRALPEEVRAYIVKLQDDRLLKATELDAFELRALSRFEPDDALRILERFAEADLRKVGNKSGFLAGIMRKYGS 1162          
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Match: A0A7S2AI36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI36_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.020e-5
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   51 SLDPEIRGRLS-----GLVKPDELDPFEVRALGKFDVADALDILDRFAEADLRKVRNRSGFLAGIMRK 113
            +L  +IR RL      GL+  DEL  +E++ LG   + DAL+ +  FAEADL+ + N+SG LAGIMR+
Sbjct:   74 ALPSKIRARLDALCNEGLLGQDELAVYELQTLGTLGLDDALEAVRCFAEADLQTIGNKSGLLAGIMRR 141          
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.430e-5
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   48 ALASLDPEIRGRLSGLV-----KPDELDPFEVRALGKFDVADALDILDRFAEADLRKVRNRSGFLAGIMRK 113
            AL+ + P++R  L  LV     K +ELD FE+ AL   ++   L ++  F E+DLRK  N+SG LAGI+R+
Sbjct:  965 ALSGMLPQVREALEALVRQRLVKLEELDTFELTALAALELEQGLQVVAAFGESDLRKAGNKSGMLAGILRR 1035          
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Match: A0A7S4FHT4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FHT4_9EUGL)

HSP 1 Score: 54.3 bits (129), Expect = 2.950e-5
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   51 SLDPEIRGRL-----SGLVKPDELDPFEVRALGKFDVADALDILDRFAEADLRKVRNRSGFLAGIMRK 113
            SL P++  +L     SG+V PDELD   + +L +F     LDIL +F+EA+ + + N+SGF+AGIMR+
Sbjct:  223 SLAPQVDAQLQALFASGVVAPDELDSKILDSLAQFPPEVGLDILGKFSEANPQNISNKSGFMAGIMRR 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12690.2238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LHP2_ECTSI5.700e-3685.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCK8_9STRA2.320e-1359.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2AI36_9STRA1.020e-545.59Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6U1AHC6_9STRA1.430e-542.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4FHT4_9EUGL2.950e-544.12Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 61..113
e-value: 3.1E-12
score: 46.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12690contigH-canaliculatus_F_contig12690:202..3038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12690.2238.1mRNA_H-canaliculatus_F_contig12690.2238.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12690 202..3039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12690.2238.1 ID=prot_H-canaliculatus_F_contig12690.2238.1|Name=mRNA_H-canaliculatus_F_contig12690.2238.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=195bp
GGVASRGAGGRRRFLKESDRKEAAAAEAAAAAATSKNLRKTEAELTVALA
SLDPEIRGRLSGLVKPDELDPFEVRALGKFDVADALDILDRFAEADLRKV
RNRSGFLAGIMRKHGSAATTTKTSDAAAPAAAAAAAAASPGAAGNTASEV
LATSEAPPTATKPSSAADAEDEEEEQGPGRDADTEAAAAAAAAEE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD