prot_H-canaliculatus_F_contig1269.2234.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1269.2234.1
Unique Nameprot_H-canaliculatus_F_contig1269.2234.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length300
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1269.2234.1 vs. uniprot
Match: D7G7M5_ECTSI (Delta protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M5_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.610e-50
Identity = 83/133 (62.41%), Postives = 102/133 (76.69%), Query Frame = 0 
Query:  168 SIASSDCDGDNPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVPGGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSM 300
            + +SS CDG NPC NGGSC+ DPAGGYFCSCA+G+AGM CQ  TDG+P W I+L+FEGE+FT   + +FQR+A RW  VI + PGGG P+ PAG L+IS  + + DG GG+LGSAGPTG W +YP ISYSG M
Sbjct:  359 AASSSSCDGGNPCQNGGSCSTDPAGGYFCSCAEGFAGMVCQINTDGLPPWYIELEFEGEDFTDDLKAIFQRSAARWERVILYTPGGGTPSTPAGRLLISVTIVAKDGKGGVLGSAGPTGTWWEYPSISYSGIM 491
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BLAST of mRNA_H-canaliculatus_F_contig1269.2234.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.730e-26
Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:  178 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSM 300
            NPCMNGGSC  DP GGY CSC   Y GM C+T   G+  + I +DF G  ++  R+ VFQRAA+RW+E+++H+P  G       AG L I++ L  IDG  G LG AGP G + D  GISYSG M
Sbjct:  404 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEM 527
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BLAST of mRNA_H-canaliculatus_F_contig1269.2234.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.780e-26
Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:  178 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSM 300
            NPCMNGGSC  DP GGY CSC   Y GM C+T   G+  + I +DF G  ++  R+ VFQRAA+RW+E+++H+P  G       AG L I++ L  IDG  G LG AGP G + D  GISYSG M
Sbjct:  417 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEM 540
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BLAST of mRNA_H-canaliculatus_F_contig1269.2234.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.860e-26
Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:  178 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSM 300
            NPCMNGGSC  DP GGY CSC   Y GM C+T   G+  + I +DF G  ++  R+ VFQRAA+RW+E+++H+P  G       AG L I++ L  IDG  G LG AGP G + D  GISYSG M
Sbjct:  508 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEM 631
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1269.2234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7M5_ECTSI1.610e-5062.41Delta protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D8LED3_ECTSI2.730e-2650.40WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 R... [more]
D8LED1_ECTSI2.780e-2650.40PR1-like metalloprotease n=2 Tax=Ectocarpus silicu... [more]
D7G7J6_ECTSI2.860e-2650.40Putative zinc metalloendopeptidase n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 173..208
e-value: 2.6E-5
score: 33.6
IPR000742EGF-like domainPFAMPF00008EGFcoord: 174..204
e-value: 7.9E-6
score: 26.1
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 170..208
score: 18.069
NoneNo IPR availableGENE3D2.10.25.10coord: 158..212
e-value: 2.3E-9
score: 39.2
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 173..209
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 196..207
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 196..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1269contigH-canaliculatus_F_contig1269:1139..3404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1269.2234.1mRNA_H-canaliculatus_F_contig1269.2234.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1269 1139..3404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1269.2234.1 ID=prot_H-canaliculatus_F_contig1269.2234.1|Name=mRNA_H-canaliculatus_F_contig1269.2234.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=300bp
RRASRWFRRRCRSTGGMRRTSTPTASRSALPSSLGDGEGCSRASPLSPPT
PAPVSPPTRAPASRPTPAPVSPPTPAPVSPPTPAPISPPTPAPVSQPTPA
PISPPTPTPVSPPTPAPVSPPTPASVSPPTTAPVSPPPPSPVSPPTPAPV
SPPTPAPVSPTPSPTERSIASSDCDGDNPCMNGGSCAADPAGGYFCSCAQ
GYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHV
PGGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013032EGF-like_CS
IPR000742EGF-like_dom