prot_H-canaliculatus_F_contig12648.2214.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12648.2214.1
Unique Nameprot_H-canaliculatus_F_contig12648.2214.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length433
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12648.2214.1 vs. uniprot
Match: A0A6H5KKS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS1_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 9.180e-71
Identity = 130/183 (71.04%), Postives = 144/183 (78.69%), Query Frame = 0 
Query:  234 EFAGYPLGPRKPSSAFSESGNSRSLLAAT--AXXXXXGATGEREWKYQLEGSSKWWGKPKDGHVTCMSWFPHTETVGRDGIEM-DADIRLLAVGYASGKVGLVRFSDESGPGERVCVVPAEKKSRPCTAVAWDPEHPSRLAAAWAK-------------TRSDKSLAIFDIHYISQWRERRGA 400
            EFAGYPLGPRKPSS +SE GN+RS++AAT  A     G+T +REWKY LEG SK W K KDGHVTCMSWFPH+ETVG DG+   DADIR+LAVGY+SGKVGLVRFSDE G GE VCVVPAEKK+RPC AVAWDPE+PSRLAAAW K             TRSDKSLAI DIHY+ QWR+RRGA
Sbjct:  279 EFAGYPLGPRKPSSVYSEQGNARSVMAATSAAAAAATGST-KREWKYHLEGRSKRWKKQKDGHVTCMSWFPHSETVGGDGMGTGDADIRMLAVGYSSGKVGLVRFSDEPGHGEVVCVVPAEKKNRPCKAVAWDPENPSRLAAAWTKVRRCLYRGGGALMTRSDKSLAICDIHYVRQWRQRRGA 460
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BLAST of mRNA_H-canaliculatus_F_contig12648.2214.1 vs. uniprot
Match: D7FSR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR7_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 5.380e-34
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:  233 GEFAGYPLGPRKPSSAFSESGNSRSLLAATAXXXXXGATGEREWKYQLEGSSKWWGKPKDGHVTCMSWFPHTETVGRDGIEMD-ADIRLLAVGYASGKVGLVRF 335
            GEFAGYPLGPRKPSS +SE GN+RS++AAT+     G+T  REWKY LEG SK W K KDGHVTCMSWFPH+ETVG DG+    ADIR+LAVGY+SGK G+VR+
Sbjct:  369 GEFAGYPLGPRKPSSVYSEQGNARSVMAATSAAAAAGST-NREWKYHLEGRSKRWKKQKDGHVTCMSWFPHSETVGGDGMGTGGADIRMLAVGYSSGK-GVVRY 470
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12648.2214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKS1_9PHAE9.180e-7171.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSR7_ECTSI5.380e-3469.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 247..423
e-value: 5.2E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 155..420
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 290..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12648contigH-canaliculatus_F_contig12648:439..3442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12648.2214.1mRNA_H-canaliculatus_F_contig12648.2214.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12648 439..3443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12648.2214.1 ID=prot_H-canaliculatus_F_contig12648.2214.1|Name=mRNA_H-canaliculatus_F_contig12648.2214.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=433bp
YRTATTAGFQDSVRPEGGGGNVPSGGGGGGGGGGCGSTAIDAGDASPAAA
AASAVAAVTAGAAESARARRLASGSGDGGSLFFGGGGGGGGGGDMYDSSG
TETPFANAGPEYHSPETTAGMALGFGGAAAAAAASGAGAGAGGGGGGAGG
GGAGGGSNAHSPFGSGGGGGDGSQGMGGGFVSTMPFRAGAAGGARVAAAA
AAGTAAGGSALTFGGGGSGAELQGGAAVAAGGGEFAGYPLGPRKPSSAFS
ESGNSRSLLAATAAAAAAGATGEREWKYQLEGSSKWWGKPKDGHVTCMSW
FPHTETVGRDGIEMDADIRLLAVGYASGKVGLVRFSDESGPGERVCVVPA
EKKSRPCTAVAWDPEHPSRLAAAWAKTRSDKSLAIFDIHYISQWRERRGA
PSAQAAAAVAAARIAVNSNTGSALQDSHRSLGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf