prot_H-canaliculatus_F_contig12582.2167.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12582.2167.1
Unique Nameprot_H-canaliculatus_F_contig12582.2167.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length116
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12582.2167.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.140e-32
Identity = 75/120 (62.50%), Postives = 81/120 (67.50%), Query Frame = 0 
Query:   14 EMSARERREWRRTQAAERARELRTRGRKLSPVSRPLGADRDGKVYVLFRGDPEAVYVGALPRSALAGPRGGASRDR-----------------DGGEGEEDAEAAGGNWSVFRGGAIEEL 116
            EM+ARERREWRR QAAERARELR R RKLSPVSRPLG DRDGKVY+LFRGDP AVY GALP  A A  R G  + R                  GGEGEE+ +   G WSVFRG A+EEL
Sbjct: 1938 EMTARERREWRRAQAAERARELRARSRKLSPVSRPLGMDRDGKVYLLFRGDPGAVYAGALPEGAAAALRRGRGKGRVGRPPAYATAAAGPGSKGGGEGEEEGKEGAGGWSVFRGEAVEEL 2057
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BLAST of mRNA_H-canaliculatus_F_contig12582.2167.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 3.710e-29
Identity = 75/121 (61.98%), Postives = 80/121 (66.12%), Query Frame = 0 
Query:   14 EMSARERREWRRTQAAERARELRTRGRKLSPVSRPLGADRDGKVYVLFRGDPEAVYVGALPRSALAGPRGGASRDRDG------------------GEGEEDAEAAGGNWSVFRGGAIEEL 116
            EM+ARERREWRR QAAERARELR RGRKLSPVSRPLG DRDGKVY+LFRGDP AVY GALP  A+A  R G  + R G                         EAAGG WSVFRG A+EEL
Sbjct: 2513 EMTARERREWRRAQAAERARELRARGRKLSPVSRPLGMDRDGKVYLLFRGDPGAVYAGALPEGAVAALRRGRGKGRVGRPPAYATAAXXXXXXXXXXXXXXXXEAAGG-WSVFRGEAVEEL 2632
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12582.2167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8B2_9PHAE2.140e-3262.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5K5_ECTSI3.710e-2961.98Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12582contigH-canaliculatus_F_contig12582:2722..3069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12582.2167.1mRNA_H-canaliculatus_F_contig12582.2167.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12582 2722..3071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12582.2167.1 ID=prot_H-canaliculatus_F_contig12582.2167.1|Name=mRNA_H-canaliculatus_F_contig12582.2167.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=116bp
KEAVTGGGGGGGGEMSARERREWRRTQAAERARELRTRGRKLSPVSRPLG
ADRDGKVYVLFRGDPEAVYVGALPRSALAGPRGGASRDRDGGEGEEDAEA
AGGNWSVFRGGAIEEL
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