prot_H-canaliculatus_F_contig12550.2150.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12550.2150.1
Unique Nameprot_H-canaliculatus_F_contig12550.2150.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length206
Homology
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 8.490e-138
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MDYGYPQILSIDVLRTYINLGTIRS+DGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDV+GKVIMKTLLSGMPDCKFGLNDK+IMERD +ARGR DRRP+VALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGR RVTINLKVSA FSYKLFGSNIVVKV
Sbjct:  118 MDYGYPQILSIDVLRTYINLGTIRSLDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVSGKVIMKTLLSGMPDCKFGLNDKLIMERDGNARGRQDRRPAVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKV 323          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 345 bits (884), Expect = 2.320e-115
Identity = 170/212 (80.19%), Postives = 188/212 (88.68%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASAR--GRPDR----RPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MDYGYPQI +IDVLR+YINLG+I ++DGDP E+GQLTSQITGAIDWRREGIRHRKNEVYIDV ESVNLLMSS GAVLRNDVTGKV+M+T LSGMP+CKFGLNDK+IME++A  R  GR       + SV LDDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV+DNVNLP RI+PAVQEEGR RVTINLK SAQFSYKLF  N+V+KV
Sbjct:  133 MDYGYPQITAIDVLRSYINLGSISTLDGDPNETGQLTSQITGAIDWRREGIRHRKNEVYIDVHESVNLLMSSTGAVLRNDVTGKVMMRTFLSGMPECKFGLNDKLIMEKEALERAGGRTAATAHGKRSVELDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVSDNVNLPFRIVPAVQEEGRTRVTINLKCSAQFSYKLFAENVVIKV 344          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 307 bits (786), Expect = 8.700e-101
Identity = 142/209 (67.94%), Postives = 178/209 (85.17%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRP---DRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ+L+IDVLR++INLGT+  +D    E   LT+QITGAIDWRR G+R+RKNEVYIDVLESVNLLMS+NG VL N+VTG+VIMKT LSGMP+C+FGLNDK+IMERD+SA  R     ++  VA+DDCTFHRCVRLGKFDADRTITF+PP+GEFELMRYRV DN++ P +++PAVQEEGR+RV+I +KV  +F  KL+ +N+V+K+
Sbjct:  117 MDFGYPQLLAIDVLRSFINLGTVNVLDDQDLEPNALTAQITGAIDWRRPGLRYRKNEVYIDVLESVNLLMSTNGTVLENNVTGQVIMKTALSGMPECRFGLNDKLIMERDSSASARAVHGAKKGGVAIDDCTFHRCVRLGKFDADRTITFVPPDGEFELMRYRVTDNIHCPFQVVPAVQEEGRSRVSITVKVMGKFGQKLYATNVVIKI 325          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A4D9D2J2_9STRA (MHD domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2J2_9STRA)

HSP 1 Score: 298 bits (763), Expect = 6.340e-97
Identity = 145/209 (69.38%), Postives = 178/209 (85.17%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDAS--ARGRPDRRPS-VALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  +I+VLR YINLGT+++ + + QE   LTSQITG IDWRR+GIR+RKNEVYIDVLESVN+LMS+ G VL +DVTG+++MK LLSG P+CKFGLNDK+IM+R+A+  A G   RR + V +DDCTFHRCVRLG+FDADRTITFIPP+GEFELMRYRV +NVNLP R+IPA+QEEGR RV +N+KV+A FS KLFG N+V+KV
Sbjct:  118 MDFGYPQNCAIEVLRQYINLGTVQA-EMEQQEPTVLTSQITGQIDWRRDGIRYRKNEVYIDVLESVNILMSATGNVLHSDVTGQIVMKALLSGWPECKFGLNDKLIMDREAAGKASGAVTRRSAGVEIDDCTFHRCVRLGRFDADRTITFIPPDGEFELMRYRVTENVNLPFRLIPAIQEEGRNRVAVNVKVTANFSSKLFGQNVVIKV 325          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 298 bits (763), Expect = 6.530e-97
Identity = 147/207 (71.01%), Postives = 177/207 (85.51%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  ++DVLR YINLG IR  D +P+ S QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+SS G +LRN+VTG+V M T L+GMP+CKFGLNDK+++E+++S +    R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE G+ +V+INLKV A FS KLF +++ +KV
Sbjct:  156 MDFGYPQNCAVDVLRLYINLGNIRPQD-EPEPS-QLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEKESSGQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEKGQTKVSINLKVIANFSDKLFATHVAIKV 356          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A7S1VT68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VT68_9STRA)

HSP 1 Score: 294 bits (753), Expect = 1.720e-95
Identity = 144/207 (69.57%), Postives = 175/207 (84.54%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  ++DVLR YINLG  R  D +P+ S QLTSQITGAIDWRREGI+H++NEVYIDVLESVNLL+SS G++LRN+VTG+V M T L+GMP+CKFGLNDK+++ER+ S      R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE G  RV+INLK+ A FS +LF +++V+K+
Sbjct:  149 MDFGYPQNCAVDVLRLYINLGQTRPQD-EPEPS-QLTSQITGAIDWRREGIKHKRNEVYIDVLESVNLLLSSTGSILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEREESGA----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEHGHTRVSINLKIIANFSDQLFATHVVIKI 349          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A7S2YSX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSX5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 5.870e-95
Identity = 141/208 (67.79%), Postives = 174/208 (83.65%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRS-IDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEE-GRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  ++DVLR YINLGT +  ++ +P    QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+S+ G+VLRN+VTG V M T L+GMP+CKFGLNDK++++++     + DR+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQEE    +V+INLKV A FS +LF +++V+K+
Sbjct:  118 MDFGYPQNCAVDVLRLYINLGTAKEKVETEPS---QLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSNTGSVLRNEVTGAVQMNTKLTGMPECKFGLNDKLVIDKE-----KEDRKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQEEPSLTKVSINLKVIANFSDQLFATHVVLKI 317          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: B7FSB1_PHATC (Predicted protein n=2 Tax=Naviculales TaxID=38748 RepID=B7FSB1_PHATC)

HSP 1 Score: 290 bits (742), Expect = 3.050e-94
Identity = 143/207 (69.08%), Postives = 174/207 (84.06%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQE-EGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  ++DVLR YINLGT +  D +P+ S +LTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+SS G VLRN+V G V M T L+GMP+CKFGLNDK+++E+D     + DR+PSV +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RIIPAVQE +   +V+I+LKV A FS +LF +++V+K+
Sbjct:  118 MDFGYPQNCAVDVLRLYINLGTAKPQD-EPEPS-KLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNVLRNEVAGSVQMNTKLTGMPECKFGLNDKLVIEKD-----KEDRKPSVDIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRIIPAVQESQNNTKVSIDLKVIANFSDQLFATHVVIKI 317          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A024G6X3_9STRA (MHD domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6X3_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.930e-93
Identity = 136/211 (64.45%), Postives = 175/211 (82.94%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGD-PQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMER-DASARGRPDRRPS---VALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            +DYGYPQ  SIDVL+ YINLG++ S DG    +  QLTSQITGAIDWRREGI++++NEVY+DV ESVNLLMSSNG VLRN+V G+V+MKT L+GMP+CK GLNDK+IM++ DA+    P ++ +   V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELM+YRV +NVNLP +I+PA QE+G  R+++ LK++A FS +LF +N+V+K+
Sbjct:  118 VDYGYPQNCSIDVLKMYINLGSLSSSDGPLATQPSQLTSQITGAIDWRREGIKYKRNEVYLDVFESVNLLMSSNGTVLRNEVAGQVVMKTSLTGMPECKLGLNDKLIMQKGDAAGSKIPGQKRATRDVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMKYRVTENVNLPFKIMPAYQEQGTTRLSVTLKIAATFSPRLFATNLVIKI 328          
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Match: A0A7S4HKQ6_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HKQ6_9STRA)

HSP 1 Score: 288 bits (738), Expect = 3.850e-93
Identity = 143/206 (69.42%), Postives = 174/206 (84.47%), Query Frame = 0
Query:    1 MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFGLNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPPEGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGSNIVVKV 206
            MD+GYPQ  ++DVLR YINLG +R  D +P+ S QLTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+SS G VLRN+VTG+V M T L+GMP+CKFGLNDK+++++++ A+    R+P V +DDCTFHRCVRLGKFDADRTITFIPP+GEFELMRYRV DN+NLP RI PAV EE   +V+INLKV A FS KLF +++V+KV
Sbjct:  158 MDFGYPQNCAVDVLRLYINLGNVRPQD-EPEPS-QLTSQITGAIDWRREGIRYKKNEVYIDVLESVNLLLSSTGNVLRNEVTGQVQMNTKLTGMPECKFGLNDKLVIDKESGAQ----RKPGVEIDDCTFHRCVRLGKFDADRTITFIPPDGEFELMRYRVTDNINLPFRITPAVLEEAM-KVSINLKVIANFSDKLFATHVVIKV 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12550.2150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE8.490e-13895.63MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9G3_9STRA2.320e-11580.19Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A6V1NZE4_HETAK8.700e-10167.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D2J2_9STRA6.340e-9769.38MHD domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2MKC8_9STRA6.530e-9771.01Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A7S1VT68_9STRA1.720e-9569.57Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2YSX5_9STRA5.870e-9567.79Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FSB1_PHATC3.050e-9469.08Predicted protein n=2 Tax=Naviculales TaxID=38748 ... [more]
A0A024G6X3_9STRA1.930e-9364.45MHD domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7S4HKQ6_9STRA3.850e-9369.42Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 46..74
score: 65.52
coord: 125..152
score: 63.64
coord: 194..206
score: 15.91
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 44..205
e-value: 3.7E-50
score: 170.7
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 55..206
score: 28.061
NoneNo IPR availableGENE3D2.60.40.1170coord: 51..166
e-value: 1.8E-56
score: 193.4
NoneNo IPR availableGENE3D2.60.40.1170coord: 167..206
e-value: 1.8E-56
score: 193.4
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 1..206
NoneNo IPR availablePANTHERPTHR10529:SF236AP-2 COMPLEX SUBUNIT MUcoord: 1..206
IPR018240Clathrin adaptor, mu subunit, conserved sitePROSITEPS00991CLAT_ADAPTOR_M_2coord: 145..159
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 44..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12550contigH-canaliculatus_F_contig12550:495..3278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12550.2150.1mRNA_H-canaliculatus_F_contig12550.2150.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12550 489..3278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12550.2150.1 ID=prot_H-canaliculatus_F_contig12550.2150.1|Name=mRNA_H-canaliculatus_F_contig12550.2150.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=206bp
MDYGYPQILSIDVLRTYINLGTIRSIDGDPQESGQLTSQITGAIDWRREG
IRHRKNEVYIDVLESVNLLMSSNGAVLRNDVTGKVIMKTLLSGMPDCKFG
LNDKIIMERDASARGRPDRRPSVALDDCTFHRCVRLGKFDADRTITFIPP
EGEFELMRYRVADNVNLPLRIIPAVQEEGRARVTINLKVSAQFSYKLFGS
NIVVKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036168AP2_Mu_C_sf
IPR018240Clathrin_mu_CS
IPR028565MHD
IPR001392Clathrin_mu