prot_H-canaliculatus_F_contig12525.2138.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12525.2138.1
Unique Nameprot_H-canaliculatus_F_contig12525.2138.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length227
Homology
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 5.840e-71
Identity = 164/227 (72.25%), Postives = 170/227 (74.89%), Query Frame = 0
Query:    1 AESLLSRDSEQLALECGVTLKAVSKLRYLVALRCQPQPPVLDRRGEADEGDGGAGGVRRAXXXXXXXHGGREEGGRLDGRGGRDEEITGAKGPAAPASSXXXXXXXXXXXXXXXXXXXXXXXXXXEEFLLSFASADALYRQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANG 227
            AESLLSRD EQLALECGV++KAVSKLRYLVALRCQPQPPV DRR   D GDG     +         HGG  EG R  G        T           XXXXXXX      XXXXXXXXXXXXX   LLSF SADALYRQAR+VGGFVTTGSDSLD LLCKGLMLHHVVE+VGRSSSGKTQ  LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADANG
Sbjct:   27 AESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDGATPNTQ--------GHGG--EGKRGAG------SSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQ--LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANG 235          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.720e-18
Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  129 LLSFASADALYRQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADA 225
            L  F SA A YR A   GG +  G  S+D LL  GL L  V E+VG++ +GKTQ  LC++AA  AAS GIGVLY+DT NGCS RR+Q+IA +R   A
Sbjct:   79 LAIFESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQ--LCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSA 173          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.770e-17
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query:  183 ASLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANG 227
            A LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADANG
Sbjct:   12 AQLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANG 56          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: S8DXH8_9LAMI (RECA_2 domain-containing protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DXH8_9LAMI)

HSP 1 Score: 62.0 bits (149), Expect = 1.530e-7
Identity = 40/81 (49.38%), Postives = 46/81 (56.79%), Query Frame = 0
Query:  147 GFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIG-VLYLDTANGCSVRRMQQIARSRYADAN 226
            GF++TG   +D LL  GL L HV E+VG SSSGKTQ   CL  A   A +  G VLY DT N CS RR+ Q        AN
Sbjct:   85 GFLSTGCGRIDVLLQGGLRLGHVTEIVGPSSSGKTQ--FCLRTASHVARNFDGEVLYFDTGNSCSARRISQFLNQFTVPAN 163          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: H2XTM5_CIOIN (DNA repair protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=H2XTM5_CIOIN)

HSP 1 Score: 57.0 bits (136), Expect = 5.110e-6
Identity = 39/90 (43.33%), Postives = 52/90 (57.78%), Query Frame = 0
Query:  138 LYRQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAV-AAASHGIGVLYLDTANGCSVRRMQQIARSRYADAN 226
            L+ +       + TG +SLD LL  G+    V E+VG SSSGKTQ  LC T AV  AAS    V+Y+DTA G S  R+ +I + R++  N
Sbjct:   71 LFHETMGTLAVLPTGCESLDDLLDAGIYTGEVTEIVGPSSSGKTQ--LCETFAVNVAASFDQNVIYIDTAGGFSAVRVGEIFKKRFSSHN 158          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: A0A8B8KP47_ABRPR (DNA repair protein RAD51 homolog 4 isoform X1 n=8 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KP47_ABRPR)

HSP 1 Score: 56.2 bits (134), Expect = 9.110e-6
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  138 LYRQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGVLYLDTANGCSVRRM 214
            L   A++    ++TG + +D LL  GL    + E+VG SSSGKTQA  CL +A   A HG  V+YLDT N  S +R+
Sbjct:   78 LLEDAQQNKRVLSTGCEGIDALLGGGLREGQLTELVGPSSSGKTQA--CLLSASTVAKHGSSVIYLDTGNSFSPQRI 152          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: A0A2K3KYY7_TRIPR (DNA repair protein rad51 4-like n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KYY7_TRIPR)

HSP 1 Score: 54.3 bits (129), Expect = 1.560e-5
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  138 LYRQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGVLYLDTANGCSVRRM 214
            L   AR+     +TG   +D L+  GL +  + E+VG SSSGKTQ  +CL +A   A H   V+YLDT N  S +R+
Sbjct:   78 LVEDARQNKHVFSTGCQGIDALIGGGLRVGQLTELVGPSSSGKTQ--VCLMSASTVAKHNCSVIYLDTGNSFSPQRV 152          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: UPI0010A55C23 (DNA repair protein RAD51 homolog 4 isoform X4 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A55C23)

HSP 1 Score: 54.3 bits (129), Expect = 3.260e-5
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  149 VTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIG-VLYLDTANGCSVRRMQQIA 218
            ++TG   +D LL  GL L  V E+VG SSSGKTQA  CL  A  AA+  IG V+YLDT N  S +R+   A
Sbjct:   89 LSTGCQGIDALLGGGLRLGQVTELVGPSSSGKTQA--CLQFATTAATKHIGFVIYLDTCNAFSPQRIAHYA 157          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: UPI0010A4F16E (DNA repair protein RAD51 homolog 4 isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4F16E)

HSP 1 Score: 54.3 bits (129), Expect = 4.320e-5
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  149 VTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIG-VLYLDTANGCSVRRMQQIA 218
            ++TG   +D LL  GL L  V E+VG SSSGKTQA  CL  A  AA+  IG V+YLDT N  S +R+   A
Sbjct:   89 LSTGCQGIDALLGGGLRLGQVTELVGPSSSGKTQA--CLQFATTAATKHIGFVIYLDTCNAFSPQRIAHYA 157          
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Match: A0A2P6N9E5_9EUKA (RAD51-like protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9E5_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 5.020e-5
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0
Query:  140 RQAREVGGFVTTGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRY 222
            ++A      + TG  +LD  L  G+   H+VE+ G+SS+GKTQ  LCL+  V +  H I  L+LDT N  S  R+QQ+  S Y
Sbjct:  177 KRAISFSSIMPTGCTALDKYLNGGIRAGHIVELYGKSSTGKTQ--LCLSLCVRSKHHKI--LWLDTNNSFSASRLQQMMSSEY 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12525.2138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LQZ5_ECTSI5.840e-7172.25RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YM23_9STRA6.720e-1853.61P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5L2A5_9PHAE2.770e-1795.56Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
S8DXH8_9LAMI1.530e-749.38RECA_2 domain-containing protein n=1 Tax=Genlisea ... [more]
H2XTM5_CIOIN5.110e-643.33DNA repair protein n=1 Tax=Ciona intestinalis TaxI... [more]
A0A8B8KP47_ABRPR9.110e-644.16DNA repair protein RAD51 homolog 4 isoform X1 n=8 ... [more]
A0A2K3KYY7_TRIPR1.560e-541.56DNA repair protein rad51 4-like n=2 Tax=Trifolium ... [more]
UPI0010A55C233.260e-550.70DNA repair protein RAD51 homolog 4 isoform X4 n=1 ... [more]
UPI0010A4F16E4.320e-550.70DNA repair protein RAD51 homolog 4 isoform X1 n=3 ... [more]
A0A2P6N9E5_9EUKA5.020e-540.96RAD51-like protein n=1 Tax=Planoprotostelium fungi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 132..222
e-value: 1.7E-10
score: 40.6
NoneNo IPR availableGENE3D3.40.50.300coord: 131..227
e-value: 2.9E-17
score: 64.9
NoneNo IPR availablePANTHERPTHR46457FAMILY NOT NAMEDcoord: 137..224
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 145..227
score: 14.401
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 149..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12525contigH-canaliculatus_F_contig12525:800..3426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12525.2138.1mRNA_H-canaliculatus_F_contig12525.2138.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12525 800..3426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12525.2138.1 ID=prot_H-canaliculatus_F_contig12525.2138.1|Name=mRNA_H-canaliculatus_F_contig12525.2138.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=227bp
AESLLSRDSEQLALECGVTLKAVSKLRYLVALRCQPQPPVLDRRGEADEG
DGGAGGVRRARGGKGGGHGGREEGGRLDGRGGRDEEITGAKGPAAPASSS
SPTATARYRSGGGGGGGGGGGGSESEEFLLSFASADALYRQAREVGGFVT
TGSDSLDCLLCKGLMLHHVVEMVGRSSSGKTQASLCLTAAVAAASHGIGV
LYLDTANGCSVRRMQQIARSRYADANG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR020588RecA_ATP-bd
IPR013632DNA_recomb/repair_Rad51_C