prot_H-canaliculatus_F_contig124.2034.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig124.2034.1
Unique Nameprot_H-canaliculatus_F_contig124.2034.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length204
Homology
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BLAST of mRNA_H-canaliculatus_F_contig124.2034.1 vs. uniprot
Match: A0A6H5K3S5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3S5_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 3.910e-76
Identity = 129/204 (63.24%), Postives = 143/204 (70.10%), Query Frame = 0 
Query:    1 MMRAVETLRQRLPGAVGATLGYSPVQASDSEDEIDDNDGGRGEFELSRG-YAGDRFNNRDGRRPRRRAGSGGTVSAAGARAGEGVGQEEND-MLWPPYTPLYTNMKVLRRKRLDASMMYSRAGPCTKVCFVLSLWGVFFLSWVGSTLASGSPYIIPEASEETNLAWSHSVFGAAAMYFVCACLTGYSWYKSSWGAKPLPTMGDT 202
            MMRAVETLRQRLP     +LGY+PV  SDS          RGEFE++ G + G R  +RD RRPRR                          +LWPPYTPLYTNMKVLRRKRLDASMMYSRAGPCTK+CF+ SLWG  FL+W+G TLASGSPYIIPE    TNLA S SVFGAAAMY VCACLTGYSWYKSSWGA+PLPT+GD+
Sbjct:    1 MMRAVETLRQRLP----PSLGYAPVLLSDSXXXXXXXX--RGEFEIAGGNFGGGRHQDRDLRRPRRXXXXXXXXXXXXXXXXXXXXXXXXXXLLWPPYTPLYTNMKVLRRKRLDASMMYSRAGPCTKICFLTSLWGASFLTWLGFTLASGSPYIIPEDPPATNLARSRSVFGAAAMYLVCACLTGYSWYKSSWGARPLPTLGDS 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig124.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K3S5_9PHAE3.910e-7663.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 149..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..203
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 126..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig124contigH-canaliculatus_F_contig124:15087..16225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig124.2034.1mRNA_H-canaliculatus_F_contig124.2034.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig124 15087..17786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig124.2034.1 ID=prot_H-canaliculatus_F_contig124.2034.1|Name=mRNA_H-canaliculatus_F_contig124.2034.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=204bp
MMRAVETLRQRLPGAVGATLGYSPVQASDSEDEIDDNDGGRGEFELSRGY
AGDRFNNRDGRRPRRRAGSGGTVSAAGARAGEGVGQEENDMLWPPYTPLY
TNMKVLRRKRLDASMMYSRAGPCTKVCFVLSLWGVFFLSWVGSTLASGSP
YIIPEASEETNLAWSHSVFGAAAMYFVCACLTGYSWYKSSWGAKPLPTMG
DTD*
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