prot_H-canaliculatus_F_contig12309.1979.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12309.1979.1
Unique Nameprot_H-canaliculatus_F_contig12309.1979.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length321
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12309.1979.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 2.690e-128
Identity = 198/317 (62.46%), Postives = 254/317 (80.13%), Query Frame = 0 
Query:    1 ARAAVGLVTLVMVFLVAGLLSCCLLPCLYKLLGASRQERLRERMDFGRRMPHFRGNLIMVLASLAAIATASGAVWGLQKSDSGLTNIERSTQDVANDLLKVLELPTDTSTALDEVQAAYDVLDSSIDQCENGYLLSPVFDQFDLNSLTDGVQSEIDNLNEESLGELASDVQGVSDAVNDTEGVRKGVVWPTLILALLFTAIFVAIGAGTYECVAFGHSTCDAASCFISPCTVLVAVVIWLCAASAVALSALTGDFCIDPDGNANSLIGDNADGDGQLAQLITYYTTDCSTENQAVDAIISAQEIAVPVLQSTLPQIY 317
            A+ + GLVTL++VFLVAGLL           LG SRQERLRERM FG++  H+ GN++MVLAS+AAIA+A+GA+WGLQ++DSGLTNIE +TQ++A D+L +L L  DTS ALD+V A+Y+ L  S+D C+NG +LS + D FD+NSLT  VQ+EID+++E++ GELA DVQ +SDAV+DTEG RKG++WP LIL+L+FTA FVA+   TYECVAFG+  C  ASC I+PCT+ VAVVIW+CAA AV+LSALTGDFCIDPD NAN LI DN D  G++A LITYYT DC++EN AVDAII+AQE+AVP++QS +P +Y
Sbjct:   54 AQYSAGLVTLIIVFLVAGLLXXXXXXXXXXXLGTSRQERLRERMKFGKQT-HYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNGAILSSLLDAFDINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTD--GEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLY 367
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BLAST of mRNA_H-canaliculatus_F_contig12309.1979.1 vs. uniprot
Match: D7FQM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM7_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 9.330e-52
Identity = 107/245 (43.67%), Postives = 156/245 (63.67%), Query Frame = 0 
Query:    6 GLVTLVMVFLVAGLLSCCLLPCLYKLLGASRQERLRERMDFGRRMPHFRGNLIMVLASLAAIATASGAVWGLQKSDSGLTNIERSTQDVANDLLKVLELPTDTSTALDEVQAAYDVLDSSIDQCENGYLLSPVFDQFDLNSLTDGVQSEIDNLNEESLGELASDVQGVSDAVNDTEGVRKGVVWPTLILALLFTAIFVAIGAGTYECVAFGHSTCDA-ASCFISPCTVLVAVVIWLCAASAVALS 249
            GL+TL  +F+ AGLL+C +LPCLY     SRQ  L  R++ G    H  G L+MVL S AA+A  S A+ GL+K+DSG+  IE  T+ +A D+L+++ LP DT+  L  V  +YDVL++S+  CEN  +   +    D  SL   VQ+ ID ++  SL ++A  VQ +SDA+  T+ +R+ +VWPT+ILAL+F A+F+ I   TYE VA    +C A  +   +P  V +AVV++LCAAS ++LS
Sbjct:    7 GLLTLASIFVAAGLLACAVLPCLYCCFRKSRQAHLVTRLENGPHR-HCAGGLLMVLVSWAALACCSSAIAGLEKADSGMLVIEDRTEAIAKDVLEIIGLPADTAVGLGLVSDSYDVLEASVGDCENPDIAQAIVAGLDFGSLASEVQTAIDEIDRTSLADIAKQVQDISDAMYTTKVLRRTIVWPTIILALVFVALFILISCTTYEAVACARPSCRAPCTGGFAPFVVFLAVVVYLCAASVISLS 250
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12309.1979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE2.690e-12862.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQM7_ECTSI9.330e-5243.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 9..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..321
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12309contigH-canaliculatus_F_contig12309:131..3640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12309.1979.1mRNA_H-canaliculatus_F_contig12309.1979.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12309 131..3640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12309.1979.1 ID=prot_H-canaliculatus_F_contig12309.1979.1|Name=mRNA_H-canaliculatus_F_contig12309.1979.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=321bp
ARAAVGLVTLVMVFLVAGLLSCCLLPCLYKLLGASRQERLRERMDFGRRM
PHFRGNLIMVLASLAAIATASGAVWGLQKSDSGLTNIERSTQDVANDLLK
VLELPTDTSTALDEVQAAYDVLDSSIDQCENGYLLSPVFDQFDLNSLTDG
VQSEIDNLNEESLGELASDVQGVSDAVNDTEGVRKGVVWPTLILALLFTA
IFVAIGAGTYECVAFGHSTCDAASCFISPCTVLVAVVIWLCAASAVALSA
LTGDFCIDPDGNANSLIGDNADGDGQLAQLITYYTTDCSTENQAVDAIIS
AQEIAVPVLQSTLPQIYAVSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety