prot_H-canaliculatus_F_contig12255.1936.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12255.1936.1
Unique Nameprot_H-canaliculatus_F_contig12255.1936.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length266
Homology
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.380e-46
Identity = 131/220 (59.55%), Postives = 143/220 (65.00%), Query Frame = 0
Query:    1 DDEAAAWGAGDGAEEDGDEWAGAXXXXXXXXXXXXXXXXXXXXXXXXXXSFGPRPAPEAWSGKKPWVDGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFCKRDSP-ATPAASVSVSGDSSTPGAAGRGCKAPSTPAEKRRRGATGVAAGTTRPPSV---EKCSGPPSEAREAN-FRENGRTLGT 215
            DDEAAAWGA  G EEDG+E                   XXXXXXXXXX   GP   P  W+GKKPWVDG ARVYSLPYSEHSSFTQLKDFVR VRPKKIVPTVNA SSASVEKMLSHFLE MDLSSDRKRL+SYFCKRD P AT +  + +   S       R     S+PAEKRR+ A    + T  PP++   EK S PP +A E N   EN  T GT
Sbjct:  314 DDEAAAWGA--GLEEDGNE-----ETMQVTANGVGVVPXXXXXXXXXXTVAGPAVGP--WTGKKPWVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRDPPSATASRGIDMLSSSGA-----RASNPFSSPAEKRRKNAN---SSTGWPPNLFPAEKPSRPPLKAAERNRLHENDATSGT 516          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A7S0PPJ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PPJ7_MICPS)

HSP 1 Score: 97.1 bits (240), Expect = 3.830e-21
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 0
Query:   56 APEAWSGKKPWV--DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFC-KRDSPATPA 145
            A E  S  KPW+  DG  RVYS+PYSEHSSF +L +FV+ +RP+++ PTVNA + A  ++++ HFLE  DL++D+ RLD YF  KR +P   A
Sbjct:   36 AAELASAYKPWIENDGRTRVYSVPYSEHSSFVELVEFVKRIRPRRVTPTVNADTKADKDRIMKHFLEFTDLAADKNRLDHYFFNKRSAPEVKA 128          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: K8YRT5_NANGC (Hydrolase involved in interstrand cross-link repair n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRT5_NANGC)

HSP 1 Score: 91.3 bits (225), Expect = 1.650e-18
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:   57 PEAWSGKKPWVD--GNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSY 134
            P + S   PWV+    A++Y +PYSEHSS+T+L+ FVRA+RP+KI+PTV A     VE+ L HFL  MDLS DR RLD Y
Sbjct:   51 PSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 130          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.760e-17
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:   57 PEAWSGKKPWVD--GNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSY 134
            P + S   PWV+    A++Y +PYSEHSS+T+L+ FVRA+RP+KI+PTV A     VE+ L HFL  MDLS DR RLD Y
Sbjct:  220 PSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 299          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.410e-17
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query:   57 PEAWSGKKPWVD--GNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSY 134
            P + S   PWV+    A++Y +PYSEHSS+T+L+ FVRA+RP+KI+PTV A     VE+ L HFL  MDLS D+ RLD Y
Sbjct:  379 PSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRY 458          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A7S0Z9D4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9D4_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 1.000e-16
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   56 APEAWSGKK-----------PWV--DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLS-HFLELMDLSSDRKRLDSYFCKRDSPA 142
            AP  WS  K           PWV  DG  R YS+PYSEHSS+T+L++FV+  +PKKI PTVNAA+    +K+++ HFL+L+DL  D  +LD YF  + S A
Sbjct:   73 APTGWSWTKKMETDEGFDVNPWVENDGRTRTYSVPYSEHSSYTELREFVKFFKPKKITPTVNAATRKERDKLVNKHFLDLVDLKQDSSKLDYYFKNKVSAA 173          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A5J4Y9L3_9CHLO (DNA cross-link repair SNM1-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9L3_9CHLO)

HSP 1 Score: 89.4 bits (220), Expect = 1.760e-16
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   57 PEAWSGKKPWV----DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFCKRDSPATPAASVSVSGDSS 155
            P  WS +K  +    +GN  +Y +PYSEHSSF +L+D V+ +RPK+I+PTVN   +AS   ++  F +LMDLS D+ RLDSYF +  + + PA +++ S  SS
Sbjct:  327 PTGWSYQKKGLQTRREGNVTIYGIPYSEHSSFAELRDCVKRLRPKRIIPTVNCPDAASARAIVDRFADLMDLSRDKSRLDSYFGR--TASAPADALANSAQSS 427          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A812HXX8_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HXX8_9DINO)

HSP 1 Score: 87.8 bits (216), Expect = 6.970e-16
Identity = 40/87 (45.98%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   50 SFGPRPAPEAWSGKKPWV--DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSY 134
            ++ P+   +  SG + W+  DG  RVYS+PYSEHSSFT+L+ FV A++P ++VPTVN+ +  S E+M++ FL+++DL  D +R+D Y
Sbjct:  916 AWSPKAMAKGSSGCRAWIENDGRTRVYSVPYSEHSSFTELQSFVSAIKPGRLVPTVNSETRESKERMMAPFLDVLDLKGDPERMDHY 1002          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 8.350e-16
Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   57 PEAWSGKKPWV----DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFCKRDSPATPAASVSV 150
            P  WS +K  +    +G+  +Y +PYSEHSSF +L+D V+ +RP++IVPTVNA++ A+   ++  F +LMDLS DR RLD +F ++   A PA + S 
Sbjct:  273 PTGWSFQKSGLSCRREGDVAIYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLD-FFLRKAKTAPPATASSA 369          
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Match: A0A812Y568_SYMPI (Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y568_SYMPI)

HSP 1 Score: 87.4 bits (215), Expect = 9.620e-16
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 0
Query:   50 SFGPRPAPEAWSGKKPWV--DGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIVPTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFCKRDSPAT 143
            ++ P+   +  +G + W+  DG  RVYS+PYSEHSSFT+L+ FV +++P +++PTVN+ +    E+M++ FLE++DL  DR+R+D Y     S +T
Sbjct:  287 AWSPKAMAKGSAGCRAWIENDGRTRVYSVPYSEHSSFTELQAFVNSIKPGRLIPTVNSETREGKERMMAPFLEVLDLKGDRERMDHYIFGGSSSST 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12255.1936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI4.380e-4659.55DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0PPJ7_MICPS3.830e-2150.54Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
K8YRT5_NANGC1.650e-1855.00Hydrolase involved in interstrand cross-link repai... [more]
W7THR8_9STRA1.760e-1755.00Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA8.410e-1753.75DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S0Z9D4_9CHLO1.000e-1647.52Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A5J4Y9L3_9CHLO1.760e-1644.66DNA cross-link repair SNM1-like n=1 Tax=Trebouxia ... [more]
A0A812HXX8_9DINO6.970e-1645.98Calmodulin n=1 Tax=Symbiodinium sp. CCMP2592 TaxID... [more]
A0A8J9WR85_9CHLO8.350e-1643.88Probable DNA cross-link repair 1A protein at N-ter... [more]
A0A812Y568_SYMPI9.620e-1641.67Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.12650coord: 58..81
e-value: 1.1E-10
score: 43.6
NoneNo IPR availablePANTHERPTHR23240:SF6DNA CROSS-LINK REPAIR 1A PROTEINcoord: 59..132
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 59..132
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 67..105
e-value: 5.8E-13
score: 49.0
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 82..104
e-value: 1.1E-10
score: 43.6
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 59..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12255contigH-canaliculatus_F_contig12255:632..1715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12255.1936.1mRNA_H-canaliculatus_F_contig12255.1936.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12255 632..1715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12255.1936.1 ID=prot_H-canaliculatus_F_contig12255.1936.1|Name=mRNA_H-canaliculatus_F_contig12255.1936.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=266bp
DDEAAAWGAGDGAEEDGDEWAGAATTTSAVDAAALATTTSTSSSPPPPPS
FGPRPAPEAWSGKKPWVDGNARVYSLPYSEHSSFTQLKDFVRAVRPKKIV
PTVNAASSASVEKMLSHFLELMDLSSDRKRLDSYFCKRDSPATPAASVSV
SGDSSTPGAAGRGCKAPSTPAEKRRRGATGVAAGTTRPPSVEKCSGPPSE
AREANFRENGRTLGTPHRRQSLSTLTRHNGVGATRGKGNATRLAYGRVVS
PCAVAVGGRRLAVASP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR011084DRMBL