prot_H-canaliculatus_F_contig12254.1935.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12254.1935.1
Unique Nameprot_H-canaliculatus_F_contig12254.1935.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length264
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12254.1935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..189
NoneNo IPR availableTMHMMTMhelixcoord: 240..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12254contigH-canaliculatus_F_contig12254:1978..2769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12254.1935.1mRNA_H-canaliculatus_F_contig12254.1935.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12254 1737..2769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12254.1935.1 ID=prot_H-canaliculatus_F_contig12254.1935.1|Name=mRNA_H-canaliculatus_F_contig12254.1935.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=264bp
MQYTEITVSEVSRDGHSRHSNMAVHRSRRKPPSKVQPFCLISSALATSSG
RPSSGRNSSVPRRRKRTEGPTSHITHQASATSFSRKHSRCVMCDVTGSYV
AVPWTPHDICLHHESLGRSGSTAADVPLNNTGTADDTLFRRLFRRRNRSF
AQTVLGISPHVPQWTLVSTFSTRSKRSYNYDVYPAAERNMLSTVFVVVVV
TAGVRHQSQPQTSRRWRGRFRPLFALTVTASRTPSTRPPLVRALSVIVRL
TLLGFGPLFFLLAL
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