prot_H-canaliculatus_F_contig12148.1856.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12148.1856.1
Unique Nameprot_H-canaliculatus_F_contig12148.1856.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length94
Homology
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: D7G2G7_ECTSI (Predicted: Tubulin-tyrosine ligase-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G7_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 4.980e-35
Identity = 71/93 (76.34%), Postives = 75/93 (80.65%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRLS 93
            MILSVF+AAARQQPGM    ARA+YGCDVMVT  LEPRLLEVTFSPGNLAASPAW            VQ+PDFLNEAFGCLFLGEQKNVTRL+
Sbjct:  639 MILSVFRAAARQQPGMRNGSARAMYGCDVMVTAALEPRLLEVTFSPGNLAASPAW-----------TVQRPDFLNEAFGCLFLGEQKNVTRLA 720          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A6H5KI06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI06_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.790e-34
Identity = 70/93 (75.27%), Postives = 74/93 (79.57%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRLS 93
            MILSVF+AA RQQPGM    ARA+YGCDVMVT  LEPRLLEVTFSPGNLAASPAW            VQ+PDFLNEAFGCLFLGEQKNVTRL+
Sbjct:  647 MILSVFRAATRQQPGMRNGSARAMYGCDVMVTAALEPRLLEVTFSPGNLAASPAW-----------TVQRPDFLNEAFGCLFLGEQKNVTRLA 728          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A388KR02_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KR02_CHABU)

HSP 1 Score: 77.8 bits (190), Expect = 1.060e-14
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            M   VF+ AA  QP M C  ARAIYGCDVM+ E+++P+LLEVT+ P     +  +      L     +   +F N  FGCLFL E+KNVT L
Sbjct:  633 MFREVFEGAAMVQPDMHCEYARAIYGCDVMLDENMQPKLLEVTYCPD---CTRGFTFEMTRLSDGAIIDPKEFYNTIFGCLFLDERKNVTSL 721          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A3S6KFN5_9SPER (Putative tubulin-tyrosine ligase n=17 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6KFN5_9SPER)

HSP 1 Score: 74.7 bits (182), Expect = 1.290e-13
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            MI +VF++A+   P M CP ARAIYG DVM+  + +P+LLEVT+ P    A   + V A    G E ++  +F N+ FGCLFL + ++V++L
Sbjct:  779 MIRAVFESASALHPEMHCPTARAIYGVDVMIDSEFQPKLLEVTYCPDCTRAC-KYDVKAVVGSG-EIIKGSEFFNDIFGCLFLNDSRHVSQL 868          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A8J8NA98_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NA98_HALGN)

HSP 1 Score: 70.5 bits (171), Expect = 3.870e-12
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   14 PGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            PG A  R RA+YG DVM+T+D +P++LEVTF P                CG      P F NE FGCL+  ++KN+ R+
Sbjct:  493 PGEASRRCRAMYGVDVMITDDYQPKILEVTFQPD---------------CGRACKFNPSFFNEVFGCLYFNDEKNMIRI 556          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: UPI00125E4C8B (tubulin--tyrosine ligase-like protein 12 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E4C8B)

HSP 1 Score: 68.9 bits (167), Expect = 1.380e-11
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            MI SVF++AA   P M  P++RA+YG DVM+  + +P+LLEVT+ P    A   +   A  + G E V+  DF N  FGCLFL E  +V+ L
Sbjct:  773 MIRSVFESAASVHPEMHHPKSRAMYGVDVMLDSNFQPKLLEVTYCPDCKRAC-TYDTEA-VVKGGETVKGRDFYNYVFGCLFLDETNHVSPL 862          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: J9IQP0_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IQP0_9SPIT)

HSP 1 Score: 65.9 bits (159), Expect = 1.680e-10
Identity = 32/73 (43.84%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   20 RARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            + R+IYG D+MV +  EP++LE TFSP                C       PDF NE FGCLFL E KNVT++
Sbjct:  806 KCRSIYGVDIMVNDQFEPKILEATFSPD---------------CKRACRFNPDFFNEVFGCLFLNETKNVTKI 863          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A162AM84_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162AM84_DAUCS)

HSP 1 Score: 64.7 bits (156), Expect = 4.270e-10
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPG-NLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            MI S F++AA   P M  P +RA+YG DVM+  + +P+LLEVT+ P  N A    +   +      E V+  DF N  FGCLFL E  +V++L
Sbjct:  786 MIKSAFESAALVHPEMHNPMSRAMYGVDVMLDTNFQPKLLEVTYCPDCNRACK--YDTKSVLRGETETVKGQDFYNYVFGCLFLNETAHVSQL 876          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: F0YE75_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE75_AURAN)

HSP 1 Score: 63.9 bits (154), Expect = 7.810e-10
Identity = 41/89 (46.07%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    5 VFKAAARQQPGM--ACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTR 91
            VF AAA Q  G   A P ARA YGCD ++ EDL+P LLE+TF+P  L +S   P         E V  P   ++ F CLFLG    VTR
Sbjct:  540 VFAAAADQHAGFRDASPTARAAYGCDFLLDEDLKPYLLEITFAPAPLWSSADMP---------EVV--PGVADDIFACLFLGAGDRVTR 617          
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Match: A0A2R6S2A6_ACTCC (Tubulin--tyrosine ligase-like protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6S2A6_ACTCC)

HSP 1 Score: 62.8 bits (151), Expect = 2.030e-9
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLAASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRL 92
            MI SVF++AA   P M   ++RA+YG DVM+    +P+LLEVT+ P    A   + + A F  G E V+  DF N  FGCLFL E  + + L
Sbjct:  781 MIRSVFESAAVVHPEMQSSKSRAMYGVDVMLDCQFQPKLLEVTYCPDCTRAC-KYDMEAIF-GGGEIVKCCDFYNYVFGCLFLNETTHTSPL 870          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12148.1856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G2G7_ECTSI4.980e-3576.34Predicted: Tubulin-tyrosine ligase-related protein... [more]
A0A6H5KI06_9PHAE1.790e-3475.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A388KR02_CHABU1.060e-1445.65Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A3S6KFN5_9SPER1.290e-1343.48Putative tubulin-tyrosine ligase n=17 Tax=Cupressa... [more]
A0A8J8NA98_HALGN3.870e-1241.77Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
UPI00125E4C8B1.380e-1144.57tubulin--tyrosine ligase-like protein 12 n=2 Tax=I... [more]
J9IQP0_9SPIT1.680e-1043.84Uncharacterized protein n=1 Tax=Oxytricha trifalla... [more]
A0A162AM84_DAUCS4.270e-1041.94Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
F0YE75_AURAN7.810e-1046.07Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2R6S2A6_ACTCC2.030e-943.48Tubulin--tyrosine ligase-like protein n=2 Tax=Acti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 16..46
e-value: 5.8E-6
score: 25.6
IPR027749Tubulin--tyrosine ligase-like protein 12PANTHERPTHR46088FAMILY NOT NAMEDcoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12148contigH-canaliculatus_F_contig12148:186..1034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12148.1856.1mRNA_H-canaliculatus_F_contig12148.1856.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12148 180..1034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12148.1856.1 ID=prot_H-canaliculatus_F_contig12148.1856.1|Name=mRNA_H-canaliculatus_F_contig12148.1856.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=94bp
MILSVFKAAARQQPGMACPRARAIYGCDVMVTEDLEPRLLEVTFSPGNLA
ASPAWPVSAGFLCGHEAVQQPDFLNEAFGCLFLGEQKNVTRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027749TTLL12
IPR004344TTL/TTLL_fam