prot_H-canaliculatus_F_contig1213.1849.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1213.1849.1
Unique Nameprot_H-canaliculatus_F_contig1213.1849.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length221
Homology
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: D7FQI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI6_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 9.020e-71
Identity = 133/195 (68.21%), Postives = 152/195 (77.95%), Query Frame = 0
Query:   24 DSSSPGGLVTPENAVAELRGGSELAATPDQNATHSKTSSLSSTRPEPE-EPVISTKS---EKMV-KEDVLTARHAERVLVVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSI----NEKE-TKPVPE 208
            D+ S GG +TPE+   E++ GSE A TP++  T  + + L    P  E EPVI+  +   EKM  KEDVL A+H ERVLVVGKGV+LTANVTSCDKVVVEG FQGNIKTGTFVL+EGG MEGEVRC+DGCIGGNMKATI+ASK LLIGKAAVVTGDMVYD+LQV+DGGRLQGKL HYSS     N KE +KPV E
Sbjct:   21 DTRSLGG-ITPESVTPEIQSGSERAGTPNRLGTLPEPAELEEEEPAAEAEPVIAASTPQEEKMPDKEDVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIKTGTFVLSEGGQMEGEVRCSDGCIGGNMKATIIASKTLLIGKAAVVTGDMVYDSLQVLDGGRLQGKLTHYSSTTAGENGKEGSKPVQE 214          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A6H5JYZ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ3_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 7.210e-65
Identity = 127/194 (65.46%), Postives = 150/194 (77.32%), Query Frame = 0
Query:   24 DSSSPGGLVTPENAVAELRGGSELAATPDQNATHSKTSSLSSTRPEPE-EPVI--STKSEKM-VKEDVLTARHAERVLVVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSI----NEKE-TKPVPE 208
            D+ S GG +TPE+   E++ GSE A TP++  T    + L    P  E +PVI  ST  EKM  +E VL A+H ERVLVVGKGV+LTANVTSCDKVVVEG FQGNI+TGTFVL+EGG MEGEVRC++GCIGGNMKATI+AS+ LLIGKAAVVTGDMVYD+LQV++GGR+QGKL HYSS     N KE +KPV E
Sbjct:  148 DTRSLGG-ITPESVTPEIQSGSERAGTPNRLGTLPGPAELEEEEPAAETKPVIAASTPEEKMPAEEGVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIETGTFVLSEGGQMEGEVRCSEGCIGGNMKATIIASETLLIGKAAVVTGDMVYDSLQVLEGGRIQGKLTHYSSSTAGENGKEGSKPVQE 340          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: D7FXK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXK1_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.260e-12
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   94 ERVLVVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILA-SKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINEKETKPVP 207
            +RVLVVGK V++TA+V +CD V+V+G   GNI     V+ +GG M G V C +  + G+ +   +    +L +   A V G   Y  L V DG  L G+L +  S+ ++   P P
Sbjct:   77 KRVLVVGKSVVMTADVENCDAVIVQGNLDGNIVAKYVVIMKGGCMRGTVVCEEADVAGSFEGVEMTIHHRLTLSGTARVGGKTTYHRLSVHDGAILTGELQYKPSLRDETAVPAP 191          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A2E7K2V2_9RICK (Uncharacterized protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7K2V2_9RICK)

HSP 1 Score: 69.7 bits (169), Expect = 9.990e-11
Identity = 35/118 (29.66%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   89 TARHAERVLVVGKGVILTANVTSCDKVVVEGQFQGNIK-TGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINEKETKP 205
            T R ++R+L VG  + +   +T+CD++V+EGQ    +K   T  LAE G  +G     D  I G  +  +L + +L+I    VV G++ Y  +++  GG++ G ++  S  ++ +++P
Sbjct:  134 TGRASKRILTVGNDIQMKGEITTCDRLVIEGQVDATLKDVHTVELAESGSFKGTAEIEDAEISGIFEGDLLVTGRLIIYATGVVRGNITYGEIEIERGGQISGNISQVSEASDAKSQP 251          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A5C6U6D3_9SPHN (Polymer-forming cytoskeletal protein n=1 Tax=Sphingorhabdus soli TaxID=2601267 RepID=A0A5C6U6D3_9SPHN)

HSP 1 Score: 65.9 bits (159), Expect = 3.340e-10
Identity = 34/107 (31.78%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   98 VVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINEKETK 204
            V+G  V++T N++S   + ++G  +G++K   FV  EG  ++G +      I G ++ +I A + L+I + A +TGD+VY NL + +GG+++GK +H  +  E+  +
Sbjct:   10 VLGADVVVTGNISSTVDLHIDGCVEGDLKCANFVQGEGSAIKGAIVAETARIAGTVEGSIEA-RDLVIQRTARITGDVVYQNLTIENGGKVEGKFSHKRNAGERRAE 115          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A2D6G5Q8_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6G5Q8_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 4.250e-10
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   97 LVVGKGVILTANVTSCDKVVVEGQFQGNIKTG-TFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSS 197
            L VG+ + LT  +TSC+K+VVEGQ + ++    T V+A  GH +G    A+  I G  + T++A  KL I K   V G + Y  + +  GG + G +A   S
Sbjct:   83 LTVGRNIRLTGEITSCEKLVVEGQVEASLTDAHTIVIAPHGHFKGNASVAEADISGRFEGTLVAQDKLTIRKDGCVDGSVRYGKIVIEAGGEISGDMASLDS 184          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A6N6VHR0_9HYPH (Polymer-forming cytoskeletal protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VHR0_9HYPH)

HSP 1 Score: 65.1 bits (157), Expect = 2.090e-9
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0
Query:   99 VGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKL 192
            VG+G+ L   + SCD +V+EG  Q  I++GT  ++E G + GE       I G    T++  K L I     VTG + Y  L+V  GGRL G++
Sbjct:   74 VGRGLRLEGKIESCDSLVIEGDVQATIESGTLTISETGEVRGEATVDQAEIQGRFDGTLVVRKCLTINATGKVTGTIRYGELKVEQGGRLTGQV 167          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A2E1EK97_9HYPH (Cell shape determination protein CcmA n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EK97_9HYPH)

HSP 1 Score: 63.9 bits (154), Expect = 7.930e-9
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   99 VGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINEKETK 204
            VG+G+ L   + SCD +V+EG  Q  I++GT  ++E G + G+       I G    T+   K L I  +  VTG + Y  L+V  GG++ G++   S   E+ T+
Sbjct:   83 VGRGLKLEGKIQSCDSLVIEGDVQATIESGTLTISETGDVRGDATVDAAEINGKFDGTLTVRKCLTINSSGRVTGTVQYGELKVEQGGQVSGEIRAGSDSGEEGTE 188          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A2N3EDR5_9PROT (Cell shape determination protein CcmA n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EDR5_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 1.410e-8
Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 0
Query:   89 TARHAERVLVVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKL 192
            T  HA   L VG+G+ L   + SCD +V+EG  Q  I++GT  ++E G + GE    +  I G  + T+   K L I     + G + Y  L+V  GG++ G++
Sbjct:   71 TPTHAAN-LHVGRGLKLEGKIQSCDALVIEGDVQATIESGTLTISETGEVRGEATVDEAEINGKFEGTLTVRKCLTINATGRINGKVRYGELRVEQGGQISGEI 173          
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Match: A0A2N3DXE7_9PROT (Cell shape determination protein CcmA n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-13 TaxID=2013659 RepID=A0A2N3DXE7_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 1.830e-8
Identity = 34/121 (28.10%), Postives = 66/121 (54.55%), Query Frame = 0
Query:   89 TARHAERVLVVGKGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIGGNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINEKETKPVPEI 209
            T  H     ++G  V++T NV +   + V+G+ +G++K    V  E   ++G V      + G +  +I A K L++  +A +TGD++Y+N+ + +GG++ GKL+H  +   K   P+  +
Sbjct:   25 TGAHHTTFSILGSDVVVTGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAVIAETAKLAGLVDGSIEA-KTLIVHASARITGDVIYENITIENGGQVDGKLSHRRAGAVKGPPPLEVV 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1213.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI6_ECTSI9.020e-7168.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYZ3_9PHAE7.210e-6565.46Reverse transcriptase domain-containing protein n=... [more]
D7FXK1_ECTSI3.260e-1236.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2E7K2V2_9RICK9.990e-1129.66Uncharacterized protein n=1 Tax=Rickettsiales bact... [more]
A0A5C6U6D3_9SPHN3.340e-1031.78Polymer-forming cytoskeletal protein n=1 Tax=Sphin... [more]
A0A2D6G5Q8_9PROT4.250e-1036.27Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A6N6VHR0_9HYPH2.090e-937.23Polymer-forming cytoskeletal protein n=1 Tax=Parvi... [more]
A0A2E1EK97_9HYPH7.930e-933.02Cell shape determination protein CcmA n=2 Tax=Hyph... [more]
A0A2N3EDR5_9PROT1.410e-833.65Cell shape determination protein CcmA n=1 Tax=Alph... [more]
A0A2N3DXE7_9PROT1.830e-828.10Cell shape determination protein CcmA n=1 Tax=Alph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 98..192
e-value: 4.9E-15
score: 55.6
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 92..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1213contigH-canaliculatus_F_contig1213:9060..13621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1213.1849.1mRNA_H-canaliculatus_F_contig1213.1849.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1213 9060..13742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1213.1849.1 ID=prot_H-canaliculatus_F_contig1213.1849.1|Name=mRNA_H-canaliculatus_F_contig1213.1849.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=221bp
MSGRRRIAVGRKFSRSFSKEAVGDSSSPGGLVTPENAVAELRGGSELAAT
PDQNATHSKTSSLSSTRPEPEEPVISTKSEKMVKEDVLTARHAERVLVVG
KGVILTANVTSCDKVVVEGQFQGNIKTGTFVLAEGGHMEGEVRCADGCIG
GNMKATILASKKLLIGKAAVVTGDMVYDNLQVIDGGRLQGKLAHYSSINE
KETKPVPEIKEIKEIKEIKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B