prot_H-canaliculatus_F_contig1199.1738.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1199.1738.1
Unique Nameprot_H-canaliculatus_F_contig1199.1738.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length488
Homology
BLAST of mRNA_H-canaliculatus_F_contig1199.1738.1 vs. uniprot
Match: D7FX17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX17_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.390e-43
Identity = 103/241 (42.74%), Postives = 149/241 (61.83%), Query Frame = 0
Query:  121 KVDVFIDLACPKSAEAWPFLKKVVQEQRHRAQFVFHVLPLSDDPIGYFAAKAVQVILVNSGGAYDDVKDFMDWVFRGRDIVFFDGNA-DMTLD-AREVVTDWAVSSTSLSFTRFHSAMQDPTFDERVLEDLEDRFVLSVQSTPTVLLNGVFMMHLDGERERTDFQFFLDSPRFPSFDDDRSSRFSSSGVVGGPSSTSXXX------SRSDMWEQMGEEMRESYADMV-QRQEQQSIVREQQ 352
            KVDVF+ L C KSA AWP LK+   +QR+   FVFH+LPLSDDPI Y AAKA QV+L  +G   D V+ F+D +F G++ +  D    D+T+D AR+++ DW +S +S+    FHSAM+DP FD  VL DL + F  +V  TP+V+LNG F+M L G+R   DFQ FL+  +            S SG+ GG   ++         S   MW++M +E+ ++Y DM+ ++Q+QQ  +RE++
Sbjct:   63 KVDVFLGLGCEKSARAWPVLKRAASDQRNSVDFVFHILPLSDDPIVYSAAKAAQVLLAYAGETSDGVEGFVDLIFLGQEAIHGDQQGMDLTVDEARDIIGDWPLSFSSIPADVFHSAMRDPLFDPIVLGDLGNIFTAAVSGTPSVVLNGNFIMLLCGDRGLRDFQMFLEHFQIED---------SGSGIRGGGGGSAVFGLDDKWGSAWPMWQKMDQEIGDAYQDMLAEQQQQQEKLREKE 294          
BLAST of mRNA_H-canaliculatus_F_contig1199.1738.1 vs. uniprot
Match: A0A6H5JDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ3_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.720e-34
Identity = 93/239 (38.91%), Postives = 132/239 (55.23%), Query Frame = 0
Query:  121 KVDVFIDLACPKSAEAWPFLKKVVQEQRHRAQFVFHVLPLSDDPIGYFAAKAVQVILVNSGGAYDDVKDFMDWVFRGRDIVFFDGNADMTLD-AREVVTDWAVSSTSLSFTRFHSAMQDPTFDERVLEDLEDRFVLSVQSTPTVLLNGVFMMHLDGERERTDFQFFLDSPRFPSFDDDRSSRFSSSGVVGGPSST-----SXXXSRSDMWEQMGEEMRESYADMV-QRQEQQSIVREQQ 352
            KVDVF+ L C KSA AWP LK+   +QR+R  FVFH+LP+SDDPI    AKA+           DD +  MD                +T+D AR+++ DW +S +S+    FHSAM++P FD  VL DL + F  +V  TP+V+LNG F+M L G+    DFQ FL+  +            S SG+ GG  S          S   MW++M +E R++Y DM+ ++Q+QQ  +RE++
Sbjct:   10 KVDVFLGLGCEKSARAWPILKRAASDQRNRVDFVFHILPVSDDPIVLSTAKAI-----------DDDQQGMD----------------LTVDEARDIIGDWPLSFSSIPADNFHSAMRNPLFDPIVLGDLGNNFTAAVSGTPSVVLNGHFIMLLCGDTGLRDFQMFLEHFQIED---------SGSGIRGGGGSAVFGLDDTWGSAWPMWQKMDQENRDAYQDMLAEQQQQQEKLREKE 212          
BLAST of mRNA_H-canaliculatus_F_contig1199.1738.1 vs. uniprot
Match: A0A6H5L5G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5G0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.150e-14
Identity = 67/193 (34.72%), Postives = 105/193 (54.40%), Query Frame = 0
Query:  169 AAKAVQVILVNSGGAYDDVKDFMDWVFRGRDIVFFDGNA-DMTLD-AREVVTDWAVSSTSLSFTRFHSAMQDPTFDERVLEDLEDRFVLSVQSTPTVLLNGVFMMHLDGERERTDFQFFLDSPRFPSFDDDRSSRFSSSGVVGGPSSTSXXX------SRSDMWEQMGEEMRESYADM-VQRQEQQSIVREQQ 352
            A  A QVIL  +      V+ F+D  F G++ +  D    D+T+D AR+++ DW +S +S+    FHSAM+DP  D  VL DL  +F  +V STP+V+LNG F++ L G+    DF  FL+  +            S SGV GG   ++         S   +W +M +E+ +++ DM V++Q QQ  +RE++
Sbjct:    7 APSAAQVILAYASETSSGVEGFVDLTFLGQEAIDDDQQGMDLTVDEARDIIGDWPLSFSSIPADIFHSAMRDPLPDPIVLGDLGSKFTAAVTSTPSVVLNGHFIVLLCGDTGLRDFHIFLEHFQIED---------SGSGVRGGGGGSAVFGLDDTWGSARPLWHKMDQEIGDAFQDMLVEQQLQQEKLREKE 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1199.1738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX17_ECTSI3.390e-4342.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDZ3_9PHAE1.720e-3438.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5G0_9PHAE1.150e-1434.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 118..283
e-value: 5.9E-17
score: 64.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..488
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 121..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1199contigH-canaliculatus_F_contig1199:17806..22122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1199.1738.1mRNA_H-canaliculatus_F_contig1199.1738.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1199 17806..22123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1199.1738.1 ID=prot_H-canaliculatus_F_contig1199.1738.1|Name=mRNA_H-canaliculatus_F_contig1199.1738.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=488bp
SFSSPVGIRGKRKHESLVSHHPHLLALRIPAAHHTSLGRVLQQENQNLRT
MKTTTTSTSKMAMLASSAVTLVLCLLGCTSVTSTIASDTTVVEHLPPPHN
LAPPGGGTTSLRRESSYEFGKVDVFIDLACPKSAEAWPFLKKVVQEQRHR
AQFVFHVLPLSDDPIGYFAAKAVQVILVNSGGAYDDVKDFMDWVFRGRDI
VFFDGNADMTLDAREVVTDWAVSSTSLSFTRFHSAMQDPTFDERVLEDLE
DRFVLSVQSTPTVLLNGVFMMHLDGERERTDFQFFLDSPRFPSFDDDRSS
RFSSSGVVGGPSSTSSSSSRSDMWEQMGEEMRESYADMVQRQEQQSIVRE
QQLPWKQQLDNADGVTKKQWYESASSSAFSATFSPVSSSPCSTAATSPSW
GSFSFPGSSVAGYASTWPDSDGSSSSASSSSSSTKSTPPSSSPLLSWAWP
RWPSFVASLFRGRRDDRDAGGMWGWGPQIDCADAAHPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf