prot_H-canaliculatus_F_contig1191.1674.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1191.1674.1
Unique Nameprot_H-canaliculatus_F_contig1191.1674.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length318
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1191.1674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..317
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..137
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..38
score: 0.525
NoneNo IPR availableTMHMMTMhelixcoord: 21..38
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 183..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1191contigH-canaliculatus_F_contig1191:49..1714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1191.1674.1mRNA_H-canaliculatus_F_contig1191.1674.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1191 49..5856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1191.1674.1 ID=prot_H-canaliculatus_F_contig1191.1674.1|Name=mRNA_H-canaliculatus_F_contig1191.1674.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=318bp
MEWRSRRKRGFASTPPSSTRFLVAPVELFLLLSGPAQAGPTRVKNMDAPS
PAPSVPGLASSSSPTADEIAPEATPDPQETVQPRPPLRSMPPGEAPSASS
PESSDDFGGFGIAAIVTASVVSVFLLAALVLTCVWLKSHCAEKGKSIRRS
LEELIGKGSLWGAILVVVGLMVALNAYTVSMLWTVVSVFGTFVMCFGIVA
WFIAFQTGSPAVVSLELPRRSAPTSVRSDSGERSGGGGGSGRSIASNSTC
ETPRGCSFAASPTVTDLPSWGKGDSLRQSPAADAPASPARGAADSFFPDT
YVRAVYIPAHSVDGLQP*
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