prot_H-canaliculatus_F_contig11625.1436.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11625.1436.1
Unique Nameprot_H-canaliculatus_F_contig11625.1436.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length171
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11625.1436.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.270e-71
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0 
Query:    1 MPILPGEVAAMRRQRLVKAAEPLNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPLILPPIKPPRRRKTLWDFLLDEMRLIATDYHEERKLSRHLLGGVAKRMQLARRELCEGRPEALDGRVADAGKSIRRHISLLTSSPP 145
            +PI PGEVAAMRRQRLVKAAEP NQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKP ILPP+KPPRRRKTLWDFLLDEMRLIATDY+EERKL+RHLL GVA R +LARRE CEGRP+A DGRVADAG +I RH+SLL SSPP
Sbjct:  257 LPIPPGEVAAMRRQRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARREFCEGRPQARDGRVADAGVAICRHLSLLGSSPP 401
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BLAST of mRNA_H-canaliculatus_F_contig11625.1436.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.430e-71
Identity = 126/144 (87.50%), Postives = 134/144 (93.06%), Query Frame = 0 
Query:    1 MPILPGEVAAMRRQRLVKAAEPLNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPLILPPIKPPRRRKTLWDFLLDEMRLIATDYHEERKLSRHLLGGVAKRMQLARRELCEGRPEALDGRVADAGKSIRRHISLLTSSP 144
            +PILPGEVAAMRR RLVKAAEP NQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKP ILPP+KPPRRRKTLWDFLLDEMRLIATDY+EERKL+RHLL GVA R +LARRELCEGRP+A DGRVADAG +I RH+SLL SSP
Sbjct:  689 LPILPGEVAAMRRHRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARRELCEGRPQARDGRVADAGVAICRHLSLLASSP 832
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11625.1436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHX4_9PHAE1.270e-7186.90SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
D7FME7_ECTSI1.430e-7187.50Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014012Helicase/SANT-associated domainPFAMPF07529HSAcoord: 65..108
e-value: 2.4E-4
score: 21.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11625contigH-canaliculatus_F_contig11625:774..2140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11625.1436.1mRNA_H-canaliculatus_F_contig11625.1436.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11625 751..2140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11625.1436.1 ID=prot_H-canaliculatus_F_contig11625.1436.1|Name=mRNA_H-canaliculatus_F_contig11625.1436.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=171bp
MPILPGEVAAMRRQRLVKAAEPLNQRGLTRFQLSQMLEEKTKAFKDVRAR
LRLVLERKPLILPPIKPPRRRKTLWDFLLDEMRLIATDYHEERKLSRHLL
GGVAKRMQLARRELCEGRPEALDGRVADAGKSIRRHISLLTSSPPRAGVK
KPPVQNGAAGRGGAGKGLLLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014012HSA_dom