prot_H-canaliculatus_F_contig11615.1426.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11615.1426.1
Unique Nameprot_H-canaliculatus_F_contig11615.1426.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length89
Homology
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: A0A6H5JSV0_9PHAE (TRUD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV0_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.040e-30
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 MRVTAEAVRAGVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRPAAQNVPP 80
            +RV+AE  RAGVF+IKHVVLPLPG+SV FPL++VGEEML SLKQDGVDDVIL GHPQ+ FDL GAYRHV+V P   +V P
Sbjct:  226 VRVSAEVARAGVFTIKHVVLPLPGNSVMFPLNAVGEEMLMSLKQDGVDDVILNGHPQRAFDLEGAYRHVMVHPRDFDVKP 305          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 8.290e-30
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 MRVTAEAVRAGVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVV 70
            +RVTAEA RAGVF+IKHVVLPLPG+SV FPL+ VGEEML SLKQDGVDDVIL GHPQK FDL GAYRHV+
Sbjct:  496 VRVTAEAARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLVSLKQDGVDDVILNGHPQKAFDLEGAYRHVM 565          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.920e-9
Identity = 35/81 (43.21%), Postives = 44/81 (54.32%), Query Frame = 0
Query:    6 EAVRAGVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRP---AAQNVPPTAS 83
            E    G F I+HVV        + P H VG   L  L  DGV + +L+GHPQ  F L GAYRH++V+P   AA   P TA+
Sbjct:  635 EDAEQGRFGIEHVV--------EHPAHVVGTRTLHRLYADGVHETVLDGHPQSDFTLMGAYRHLIVKPEEIAAAATPSTAA 707          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: UPI001652067B (pseudouridylate synthase 7 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001652067B)

HSP 1 Score: 59.3 bits (142), Expect = 2.760e-8
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   13 FSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRP 73
            +S++ VVLPLPGHS+ +P + V +     L++DG+D   +E  PQK + L GAYRH+VV P
Sbjct:  601 YSLRDVVLPLPGHSIVYPDNHVRDWYRLMLQEDGLDIDKME-RPQKDYSLPGAYRHLVVYP 660          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: A0A7S2N074_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N074_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 1.230e-7
Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    3 VTAEAVRAGVFSIKHVVLPLPGHSVKFPLHSVG---EEMLA--SLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRP 73
            VT     AG++SI  V+LPLPGHSVK P H+V      +LA  SL  D  D      HP ++  L G+YR V+ +P
Sbjct:   72 VTEAEAAAGIYSIHDVLLPLPGHSVKLPDHTVSAVYSRVLAEWSLTMDSFD------HPSRELKLPGSYRRVLEKP 141          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: UPI001BB176DB (pseudouridylate synthase 7 homolog n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB176DB)

HSP 1 Score: 55.8 bits (133), Expect = 2.930e-7
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   13 FSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRP 73
            F+I  VVLPLPGH VK+P+H  G+     L +DG+   +L+ +  +   L+GAYR  VV+P
Sbjct:  177 FTIYDVVLPLPGHGVKYPVHQAGKWFTEELAKDGLTVEMLK-NSNRDLSLSGAYRKCVVKP 236          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: A0A7M7MZ56_STRPU (TRUD domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7MZ56_STRPU)

HSP 1 Score: 54.7 bits (130), Expect = 7.970e-7
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   13 FSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGHPQKQFDLAGAYRHVVVRP 73
            FSI  VVLPLPGH VK+P H  GE     L +D +   +L+ +  +   L+GAYR  VV+P
Sbjct:  181 FSIYDVVLPLPGHGVKYPTHKAGEWYTEELAKDDLTVEMLK-NTNRDLSLSGAYRKCVVKP 240          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: A0A225WC41_9STRA (Pseudouridylate synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WC41_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.600e-6
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   11 GVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGH----PQKQFDLAGAYRHVVVRP 73
            G++SI+ VVLPLPGH+VK+P + +G      L  DG+D   L  H      + + L G+YR++V RP
Sbjct:  553 GLYSIEDVVLPLPGHAVKYPTNEIGAAYRKMLTTDGID---LNAHFGPDGSQTYPLNGSYRNLVKRP 616          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: G4YI35_PHYSP (TRUD domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YI35_PHYSP)

HSP 1 Score: 53.5 bits (127), Expect = 2.990e-6
Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   13 FSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGH----PQKQFDLAGAYRHVVVRP 73
            +SI+ VVLPLPGH++K+P + VG      L  DG+D   L  H      + + L G+YRH+V +P
Sbjct:  551 YSIEDVVLPLPGHAIKYPTNEVGAAYRKMLTTDGID---LNAHFGPDGSQTYQLDGSYRHLVKKP 612          
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Match: H3GXX2_PHYRM (TRUD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXX2_PHYRM)

HSP 1 Score: 53.5 bits (127), Expect = 3.000e-6
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   11 GVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDVILEGH----PQKQFDLAGAYRHVVVRP 73
            G +SI+ VVLPLPGH++K+P + +G      L  DG+D   L  H      + + L G+YRH+V +P
Sbjct:  588 GQYSIEDVVLPLPGHTIKYPTNEIGAAYRKMLTTDGID---LNAHFGPDGSQTYVLDGSYRHLVKKP 651          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11615.1426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JSV0_9PHAE1.040e-3073.75TRUD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FYR3_ECTSI8.290e-3082.86Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A836CLL9_9STRA5.920e-943.21TRUD domain-containing protein n=1 Tax=Tribonema m... [more]
UPI001652067B2.760e-847.54pseudouridylate synthase 7 homolog n=1 Tax=Aplysia... [more]
A0A7S2N074_9EUKA1.230e-743.42Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
UPI001BB176DB2.930e-744.26pseudouridylate synthase 7 homolog n=1 Tax=Lytechi... [more]
A0A7M7MZ56_STRPU7.970e-745.90TRUD domain-containing protein n=1 Tax=Strongyloce... [more]
A0A225WC41_9STRA1.600e-641.79Pseudouridylate synthase n=1 Tax=Phytophthora mega... [more]
G4YI35_PHYSP2.990e-641.54TRUD domain-containing protein n=5 Tax=Phytophthor... [more]
H3GXX2_PHYRM3.000e-640.30TRUD domain-containing protein n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 1..83
e-value: 1.0E-5
score: 27.0
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 3..75
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 3..75
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 4..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11615contigH-canaliculatus_F_contig11615:2374..3102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11615.1426.1mRNA_H-canaliculatus_F_contig11615.1426.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11615 2288..3451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11615.1426.1 ID=prot_H-canaliculatus_F_contig11615.1426.1|Name=mRNA_H-canaliculatus_F_contig11615.1426.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=89bp
MRVTAEAVRAGVFSIKHVVLPLPGHSVKFPLHSVGEEMLASLKQDGVDDV
ILEGHPQKQFDLAGAYRHVVVRPAAQNVPPTASPPPAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR001656PsdUridine_synth_TruD
IPR042214TruD_catalytic