prot_H-canaliculatus_F_contig1161.1419.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1161.1419.1
Unique Name	prot_H-canaliculatus_F_contig1161.1419.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	144

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1161.1419.1 vs. uniprot
Match: A0A6H5JTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTD4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 7.500e-50
Identity = 91/131 (69.47%), Postives = 102/131 (77.86%), Query Frame = 0

Query:   13 QEADEGGGWEAELTSQRDVALAMARQLSQQLDNQRQTLERRAKTAEGLRDMSRKECVESLEKRNRRNRGSEVHMRLAELVGGSLSAWLICVALGLAWTPLASLALGLPCTLVMAALCSKDAPRPSAKRRRD 143
            +E    G WE+EL SQRDVALAMARQLSQQLD+QR+TLE RA TAE LRD SR++C E LE   RR++ +EV  RLA LVGGSLSAWL CVALGL W P  +LALG+PCTLVMAALCSK  P PS KRR D
Sbjct:   11 EEGHTSGDWESELGSQRDVALAMARQLSQQLDSQRETLEGRATTAEALRDFSRQKCSECLESHTRRDQAAEVPARLAGLVGGSLSAWLFCVALGLTWAPRVALALGIPCTLVMAALCSKRMPWPSVKRRSD 141

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1161.1419.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1161.1419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JTD4_9PHAE	7.500e-50	69.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..60
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 134..143
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 115..133
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 110..114
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..109
None	No IPR available	TMHMM	TMhelix		coord: 88..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1161	contig	H-canaliculatus_F_contig1161:15187..20775 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1161.1419.1	mRNA_H-canaliculatus_F_contig1161.1419.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1161 14941..22247 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1161.1419.1 ID=prot_H-canaliculatus_F_contig1161.1419.1|Name=mRNA_H-canaliculatus_F_contig1161.1419.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=144bp
MIVKEVGAVDDTQEADEGGGWEAELTSQRDVALAMARQLSQQLDNQRQTL
ERRAKTAEGLRDMSRKECVESLEKRNRRNRGSEVHMRLAELVGGSLSAWL
ICVALGLAWTPLASLALGLPCTLVMAALCSKDAPRPSAKRRRD*