prot_H-canaliculatus_F_contig11589.1401.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11589.1401.1
Unique Nameprot_H-canaliculatus_F_contig11589.1401.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length151
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11589.1401.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.200e-59
Identity = 105/112 (93.75%), Postives = 110/112 (98.21%), Query Frame = 0 
Query:   36 FRPSSGGSDKSISKRKMRDAQAKVKAASEKVPERTMAENEQLLRQKILGSIGGGPFELLRAFRKMHRGRGTVVDIDDFREAVKTFSLGLGEQEVVAFFKGFDADGSGGIDFE 147
            FRPSSGGSDKS+SKRKMRDAQAKVKAASE+VPERTMAENEQLLRQKILGSIGGGPF+LLRAFRKMHRGRGTVVD++DFREAVKTFSLGLGE EV AFFKGFDADGSGGIDFE
Sbjct:  224 FRPSSGGSDKSVSKRKMRDAQAKVKAASERVPERTMAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFE 335
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BLAST of mRNA_H-canaliculatus_F_contig11589.1401.1 vs. uniprot
Match: A0A6H5KCV0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV0_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 9.170e-8
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:  107 VVDIDDFREAVKTFSLGLGEQEVVAFFKGFDADGSGGIDF 146
            V+D   FRE VK  +LGL E E++ FF+ FDADGSGGIDF
Sbjct:    2 VIDFKGFREGVKKLNLGLTEPEILDFFRSFDADGSGGIDF 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11589.1401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWU7_ECTSI1.200e-5993.75EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
A0A6H5KCV0_9PHAE9.170e-862.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableGENE3D1.10.238.10coord: 32..148
e-value: 2.5E-10
score: 42.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 107..147
e-value: 8.1E-7
score: 28.8
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 93..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11589contigH-canaliculatus_F_contig11589:1817..3596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11589.1401.1mRNA_H-canaliculatus_F_contig11589.1401.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11589 1202..4142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11589.1401.1 ID=prot_H-canaliculatus_F_contig11589.1401.1|Name=mRNA_H-canaliculatus_F_contig11589.1401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=151bp
METINDAGGDEDDSGGGDDDGDGGGARRRQGGGGGFRPSSGGSDKSISKR
KMRDAQAKVKAASEKVPERTMAENEQLLRQKILGSIGGGPFELLRAFRKM
HRGRGTVVDIDDFREAVKTFSLGLGEQEVVAFFKGFDADGSGGIDFEARA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom