prot_H-canaliculatus_F_contig11436.1264.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11436.1264.1
Unique Nameprot_H-canaliculatus_F_contig11436.1264.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length167
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11436.1264.1 vs. uniprot
Match: D8LSP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP3_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 5.520e-47
Identity = 94/166 (56.63%), Postives = 116/166 (69.88%), Query Frame = 0 
Query:    1 MWSCRLPALLSTLLWSTQAFFVPPSCTNKGHLRFRSQGQDVEQPSARCSGRAAVDNASISRHQRQRTGASAAVMSDTGSACGRKAFLTKITGTAAGAVLAAAAVAPKMSEAKEAAVDTPVDWTAEFGEVKRATDLVLSDLRGLTTKGEWAQLMEQAKGYDQSMRKG 166
            MWS  L ALLST LWSTQAF VP   T +G +R RS G   +QP A+  GR     A+    +++RT A++A+  +TGS C RK FL+ +T   AGA LAA  + P M+ AK+AA D+PVDWTAEFG VK+ATDLVL DL+ L T G+W QLMEQAKGYDQS+RKG
Sbjct:    1 MWSRPLSALLSTFLWSTQAFLVPLFATGRGEIRCRSPGYPQQQPPAQ--GRRPTIAAATRGQRQERTSATSAMSDNTGS-CDRKGFLSDLTRNVAGAGLAAITLGPNMAVAKQAA-DSPVDWTAEFGSVKKATDLVLKDLKTLATDGDWEQLMEQAKGYDQSIRKG 162
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11436.1264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSP3_ECTSI5.520e-4756.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..166
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11436contigH-canaliculatus_F_contig11436:192..2261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11436.1264.1mRNA_H-canaliculatus_F_contig11436.1264.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11436 192..2261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11436.1264.1 ID=prot_H-canaliculatus_F_contig11436.1264.1|Name=mRNA_H-canaliculatus_F_contig11436.1264.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=167bp
MWSCRLPALLSTLLWSTQAFFVPPSCTNKGHLRFRSQGQDVEQPSARCSG
RAAVDNASISRHQRQRTGASAAVMSDTGSACGRKAFLTKITGTAAGAVLA
AAAVAPKMSEAKEAAVDTPVDWTAEFGEVKRATDLVLSDLRGLTTKGEWA
QLMEQAKGYDQSMRKG*
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