prot_H-canaliculatus_F_contig11392.1233.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11392.1233.1
Unique Nameprot_H-canaliculatus_F_contig11392.1233.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length320
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11392.1233.1 vs. uniprot
Match: D8LBU8_ECTSI (Similar to centromere protein E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU8_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 8.740e-89
Identity = 212/327 (64.83%), Postives = 232/327 (70.95%), Query Frame = 0 
Query:    2 LRGKNESLRVEMDRRLHQINQEKGDLSEKMEESIRELKEREDFLHSQLEATGXXXXXIQEAQASQISEVEERLRLSNEDRERLKADARKTKAQSKSEARWRARAEDVMAGRAADLERAHAEVAAMKHQGVELRHLEAENKDLKARIERQEAFHKRRMEKEKKEKRGIR--SGHSSRASVGGSGGGTASGRT--QLLPLPPLMGSYGDXXXXXXXXXXXXXXXXXSRRPSMTPTSAGRGAEGXXXXXXXXXX-RELFASERSHSGSSPRRTGXXXXCGSGSSPCFFSSPESSSRKADVADKENKVLQAHPKQAR---APAWEAGGESG 320
            LR KNESLRVEMDRRLH +NQEKGDL+EKMEESIRELKERE+ LH QLEATG     IQEAQ+++ISE+EE+LRL+NEDRERLKADARK KA SKSEARWRARAEDVMAGRAADLERA+AEVAAMK QGVELRH+EAENKDLKARIERQEAFHKRRMEKEK+EKR  R  SG S R   G +GG  ASGR   QLLPLPPLM +YG+                 SRR SMTPTSA RG + XXXXXXXXXX RELF+SER  S S             GS               + ADKEN+V Q     A+   APAWE  G  G
Sbjct:  302 LRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEISEMEEQLRLANEDRERLKADARKAKAHSKSEARWRARAEDVMAGRAADLERANAEVAAMKQQGVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGG-AASGRAAAQLLPLPPLM-TYGEDDGRGA-----------SRRLSMTPTSASRGGDXXXXXXXXXXXXRELFSSERPRSASEAH----------GSGXXXXXXXXXXXXXXNHADKENRVQQKQAAAAQRRGAPAWEGNGGGG 605
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11392.1233.1 vs. uniprot
Match: A0A6H5KXI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI9_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.390e-64
Identity = 150/238 (63.03%), Postives = 166/238 (69.75%), Query Frame = 0 
Query:    2 LRGKNESLRVEMDRRLHQINQEKGDLSEKMEESIRELKEREDFLHSQLEATGXXXXXIQEAQASQISEVEERLRLSNEDRERLKADARKTKAQSKSEARWRARAEDVMAGRAADLERAHAEVAAMKHQGVELRHLEAENKDLKARIERQEAFHKRRMEKEKKEKRGIR--SGHSSRASVGGSGGGTASGRT--QLLPLPPLMGSYGDXXXXXXXXXXXXXXXXXSRRPSMTPTSAGRG 235
            LR KNESLRVEMDRRLH +NQEKGDL+EKMEESIRELK+RE+ LH QLEATG     IQEAQA++ISE+EE+LRL+NEDRERLKADARK KA                          H++VAAMKHQGVELRH+EAENKDLKARIERQEAFHKRRME+EK+EKR  R  SG   R   G +GG  ASGR   QLLPLPPLM SYG+                 SRR SMTPTSA RG
Sbjct:  103 LRSKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKDRENLLHGQLEATGRENKEIQEAQAAEISEMEEQLRLANEDRERLKADARKAKA--------------------------HSKVAAMKHQGVELRHMEAENKDLKARIERQEAFHKRRMEREKREKRAGRPVSGGCGRVPPGPAGG-AASGRAAAQLLPLPPLM-SYGEDDARGG-----------SRRLSMTPTSATRG 301
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11392.1233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBU8_ECTSI8.740e-8964.83Similar to centromere protein E n=1 Tax=Ectocarpus... [more]
A0A6H5KXI9_9PHAE1.390e-6463.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..164
NoneNo IPR availableCOILSCoilCoilcoord: 17..48
NoneNo IPR availableCOILSCoilCoilcoord: 67..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11392contigH-canaliculatus_F_contig11392:591..3510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11392.1233.1mRNA_H-canaliculatus_F_contig11392.1233.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11392 591..3510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11392.1233.1 ID=prot_H-canaliculatus_F_contig11392.1233.1|Name=mRNA_H-canaliculatus_F_contig11392.1233.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=320bp
QLRGKNESLRVEMDRRLHQINQEKGDLSEKMEESIRELKEREDFLHSQLE
ATGRENKEIQEAQASQISEVEERLRLSNEDRERLKADARKTKAQSKSEAR
WRARAEDVMAGRAADLERAHAEVAAMKHQGVELRHLEAENKDLKARIERQ
EAFHKRRMEKEKKEKRGIRSGHSSRASVGGSGGGTASGRTQLLPLPPLMG
SYGDDDEDDEGGGGGGGGGGGSRRPSMTPTSAGRGAEGDGGGSGGGGRRE
LFASERSHSGSSPRRTGSGSGCGSGSSPCFFSSPESSSRKADVADKENKV
LQAHPKQARAPAWEAGGESG
back to top