prot_H-canaliculatus_F_contig1139.1230.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1139.1230.1
Unique Nameprot_H-canaliculatus_F_contig1139.1230.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length664
Homology
BLAST of mRNA_H-canaliculatus_F_contig1139.1230.1 vs. uniprot
Match: A0A6H5JK16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK16_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 4.030e-80
Identity = 247/536 (46.08%), Postives = 289/536 (53.92%), Query Frame = 0
Query:  144 SFKWSSKLSVSTALSKGTGKFKRRFKASVAETTAAALQELXXXXXXXXXXXXXXXXXXEN--PATTFFPPASPSXXXXXXXXXXXXPLSDAPPSFAAPA--------PVLRSAVAAAADATGSAAPGRHSPXXXXXXXXXXXXDNKDRALVFTSPEEFSPCLAARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTVGGGPGGFLKVTACSCNVGSIRIEVAGSKHDGIYNFLAKGLGDTIRDAXXXXXXKAFSEEIEKLVHTINEWIAEVWSGIPPESKQKPARVVCAAVRAKGLARQKGELYVKVRLLQKDGTQLQKRSTAAVGVVGYSFSS-------INTTVGSVARGGDKDREHEKDEERRGPCWVGLDNDLSMELPEEDPVDLSLVFEVWHSGTITNGIVGSTRRVPVVEIKPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEESDSVWLELDSGGMLMVKLAASELTAHRRRNSVNQPTDFDAAKTVSDAATSSSAELTDSQRTIRRW 662
            S KWS+  S+STALSKGTGK KRR+KA+            XXXXXXX            +  PA++FF P SP               SDA  S + P+        P L SA   AA  T  A P   S             D    +LVF +  EFSP  AA                                  G   GG   FLKVTACSC VGSIRI+V GSKHDGIYNFLAKGLGDTIRDA      KAF+EEI KLV  IN+ IAE+WSG PP SK+   RVVCAAVRA+ L + K +LYVKVRL+++DGTQL+KRSTAAVG V  S +                                R PCWVGLDNDLSM LPEEDP  +SLVFEVWHSGT+ N +VGSTRRV + EI+PPS  XXXXXXXXXXXXXXXXXXXXXXXX                   + +++WL+LDSGG LMVKLA     AHRRR S ++P         +    ++ A   ++QR +RRW
Sbjct:  789 SSKWSTLKSMSTALSKGTGKIKRRWKATXXXXXXXXXXXXXXXXXXXLQRTGHHQPAPTSFQPASSFFHPPSPIDSSDK---------SDAFSSSSVPSTSRGRAITPTLPSAATTAAP-TPEALPSSRS-VPRLSSLGDNDADGGSGSLVFATAAEFSPLAAAAAARRRGSGLEGDDGEAGEVTP-----------SGISAGGTDEFLKVTACSCKVGSIRIDVDGSKHDGIYNFLAKGLGDTIRDAVREAVEKAFAEEIGKLVEGINDRIAEIWSGSPPVSKK--FRVVCAAVRAQDLPKGKTDLYVKVRLIKQDGTQLEKRSTAAVGAVATSAAMSIPXXXXXXXXXXXXXXXXXXXXXXXXXAPARNPCWVGLDNDLSMNLPEEDPDGMSLVFEVWHSGTLANALVGSTRRVTMSEIEPPSPAXXXXXXXXXXXXXXXXXXXXXXXXRDGGATPATVLKD-----SDLNTLWLDLDSGGKLMVKLAVFGRAAHRRRTSFHRPGGXXXXXXXAGIPEAALAAA-ETQRALRRW 1294          
BLAST of mRNA_H-canaliculatus_F_contig1139.1230.1 vs. uniprot
Match: D8LBX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX5_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 9.400e-73
Identity = 154/282 (54.61%), Postives = 172/282 (60.99%), Query Frame = 0
Query:  277 DNKDRALVFTSPEEFSPCLAARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTVGGGPGGFLKVTACSCNVGSIRIEVAGSKHDGIYNFLAKGLGDTIRDAXXXXXXKAFSEEIEKLVHTINEWIAEVWSGIPPESKQKPARVVCAAVRAKGLARQKGELYVKVRLLQKDGTQLQKRSTAAVGVVGYSFSS-------INTTVGSVARGGDKDREHEKDEERRGPCWVGLDNDLSMELPEEDPVDLSLVFEVWHSGTITNGIVGSTRRVPVVEIKPPS 551
            D    +LVF +  EFSP  AA                                  G  GG   GFLKVTACSC VGSIRIEV GSKHDGIYNFLAKGLGDTIRDA      KAF+EEI KLV  IN+ IAE+WSG  P SK+KPAR+VCAAVRA+GL + K +LYVKVRL++KDGTQL+KRSTAAVG V  S +                                R PCWVGLDNDLSM LPEEDP  LSLVFEVWHSGT+ N +VGSTRRV + EI+PPS
Sbjct:  939 DGGSGSLVFATAAEFSPLAAAAARRRGSGLEGDAREAGELPP------------SGISGGSADGFLKVTACSCKVGSIRIEVDGSKHDGIYNFLAKGLGDTIRDAVREAVEKAFAEEIGKLVEGINDRIAEIWSGSAPVSKKKPARLVCAAVRAQGLPKGKTDLYVKVRLIKKDGTQLEKRSTAAVGAVATSAAMSIPXXXXXXXXXXXXXXXXXXXXXXXXXAPARNPCWVGLDNDLSMNLPEEDPGRLSLVFEVWHSGTLANALVGSTRRVTMSEIEPPS 1208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1139.1230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK16_9PHAE4.030e-8046.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBX5_ECTSI9.400e-7354.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 659..663
NoneNo IPR availableGENE3D3.15.10.10coord: 342..396
e-value: 9.2E-6
score: 26.7
NoneNo IPR availablePANTHERPTHR45733:SF8FORMIN-Jcoord: 103..630
NoneNo IPR availablePANTHERPTHR45733FAMILY NOT NAMEDcoord: 103..630

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1139contigH-canaliculatus_F_contig1139:4..5631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1139.1230.1mRNA_H-canaliculatus_F_contig1139.1230.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1139 4..7331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1139.1230.1 ID=prot_H-canaliculatus_F_contig1139.1230.1|Name=mRNA_H-canaliculatus_F_contig1139.1230.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=664bp
SVWLEGVSLSLSLDPGAGVDSLRRSPPPFPFTSASAASAPPPPSPSSSPV
PATSSSPVPATSPPSATPSSPPLPQHERAGGIPSEKAVYVEGDDAVCSGT
RKVAAAVAAAGTAVRVADAAVNAGGGGDGDGSSSSGGGRDGGGSFKWSSK
LSVSTALSKGTGKFKRRFKASVAETTAAALQELHQQQHQQHQQHQHQHTH
QENPATTFFPPASPSPPPPSPCPSPVPPLSDAPPSFAAPAPVLRSAVAAA
ADATGSAAPGRHSPPPSASSTLSPPDDNKDRALVFTSPEEFSPCLAARGR
RRRRRRSSDSGAGTEAAGPEGGDAGGSSPPEGTVGGGPGGFLKVTACSCN
VGSIRIEVAGSKHDGIYNFLAKGLGDTIRDAVREAVEKAFSEEIEKLVHT
INEWIAEVWSGIPPESKQKPARVVCAAVRAKGLARQKGELYVKVRLLQKD
GTQLQKRSTAAVGVVGYSFSSINTTVGSVARGGDKDREHEKDEERRGPCW
VGLDNDLSMELPEEDPVDLSLVFEVWHSGTITNGIVGSTRRVPVVEIKPP
SPAGAAAAATAAAAAAAGEGEGQGDNDSISASAVSAASAPSSASKEESDS
VWLELDSGGMLMVKLAASELTAHRRRNSVNQPTDFDAAKTVSDAATSSSA
ELTDSQRTIRRWC*
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