prot_H-canaliculatus_F_contig11380.1227.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11380.1227.1
Unique Nameprot_H-canaliculatus_F_contig11380.1227.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length295
Homology
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: D8LDU2_ECTSI (DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU2_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 3.110e-132
Identity = 228/317 (71.92%), Postives = 251/317 (79.18%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVRKGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTET-----------------LSAGAFLHPSDLPQPEEGG----LEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAY-SEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            QALYEAGYITYMRTDRPSLS EAAGVAE AVRDSFGDE+VRKGDAK VKVKGSQEAHEAIRPAL+        GA  +AT T+   +                   + G FLHP++LP  E+GG    LEEQ RALYDLVYRRTLASAMAESEADFTTVSLGA G+S G   G+E VDVV +ASGKTTVFEGFLKAY  EG D+++P       D QETELP++VEGG VVCE A+P PHRTSPPRR++EASFIKELEAKGVGRPSTYASIIGTLRTRTYVN+QGR+LTPSLTGFVVADLLREHFPDFTDTGFTAK+
Sbjct:  415 QALYEAGYITYMRTDRPSLSKEAAGVAEGAVRDSFGDEYVRKGDAKTVKVKGSQEAHEAIRPALV--------GATPAATDTADGKQAREEEXXXXXXXXXXXXXTTGGRFLHPTELPVEEDGGGGRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGD--GEEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEDARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKM 721          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A6H5KCV2_9PHAE (TOP1Ac domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV2_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 9.470e-127
Identity = 223/320 (69.69%), Postives = 242/320 (75.62%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVRKGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTET------------------LSAGAFLHPSDLPQPEEG------GLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYS-EGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            QALYEAGYITYMRTDRPSLS EAA VAE AVRDSFG E+VRKGDAK VKVKGSQEAHEAIRPAL+        GA  +AT T    +                      G FLHP++LP  E        GLEEQ RALYDLVYRRTLASAMAESEADFTTVSLGA G+S G   G+E VDVV +ASGKTTVF+GFLKAY  EG D+++P       D QETELP++VEGG VVCE A+P PHRTSPPRRY   SFIKELEAKGVGRPSTYASIIGTLRTRTYVN+QGR+LTPSLTGFVVADLLREHFPDFTDTGFTAK+
Sbjct:  116 QALYEAGYITYMRTDRPSLSKEAARVAEGAVRDSFGGEYVRKGDAKVVKVKGSQEAHEAIRPALV--------GATPAATDTHDGKQAGEEXXXXXXXXXXXXXXXXXGGRFLHPTELPVEEXXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGD--GEEVVDVVLKASGKTTVFDGFLKAYRVEGADESVPGGAAAEGDDQETELPLLVEGGEVVCEDARPAPHRTSPPRRYR--SFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKM 423          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A2T4XF30_9BACT (DNA topoisomerase 1 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4XF30_9BACT)

HSP 1 Score: 209 bits (533), Expect = 2.380e-58
Identity = 124/299 (41.47%), Postives = 170/299 (56.86%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEF----VRKGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q LYE G ITYMRTD  +LSN+A   A  AV   +G E+    VR   +KA   KG+QEAHEAIRPA                             AFLHP      E+ G+  +++ LYDL+++RT+A+ MA+++ +FT V+           A D+++   F++SGK  +F GF +AY EG DD   A E      QE +LP + EG TV  ++ + + H T PP RYTEA+ +KELE +GVGRPSTYASII T++ R Y    G+TL P+   F V +LL  HFPD  D+ FT+++
Sbjct:  310 QKLYEKGLITYMRTDSTNLSNQAIQAARSAVESQYGSEYLFERVRNYSSKA---KGAQEAHEAIRPA---------------------------GSAFLHP------EKAGVAGREKKLYDLIWKRTIATQMADAQLEFTNVTT---------TATDKDLSADFKSSGKKILFPGFFRAYVEGSDDPEAALEN-----QEIDLPALAEGDTVSLQELETIGHETKPPARYTEATLVKELENRGVGRPSTYASIISTIQDREYATKDGKTLVPTFIAFAVTELLEAHFPDLVDSDFTSEL 558          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A0M2PVX9_PROHO (DNA topoisomerase 1 n=1 Tax=Prochlorothrix hollandica PCC 9006 = CALU 1027 TaxID=317619 RepID=A0A0M2PVX9_PROHO)

HSP 1 Score: 206 bits (523), Expect = 1.010e-56
Identity = 122/296 (41.22%), Postives = 159/296 (53.72%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVR-KGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q+LYE GYITYMRTD   LS++A   A   V   +G E++  K      K K +QEAHEAIRPA                                  S    P+E GL +Q+R LYDL+++RT+AS MA++     TV +  +             +  FRASGK   F GF +AY EG DD   A E      QE  LP +  G T  C++   V H T PP R+TEA+ +K LE++G+GRPSTYASIIGT+  R Y ++QG  LTP+ T F V + L +HFPD  DTGFTA++
Sbjct:  329 QSLYERGYITYMRTDSVHLSDQAITAARTCVEQKYGSEYLSPKPRQYTTKSKNAQEAHEAIRPA---------------------------------GSQFRTPQETGLVDQERKLYDLIWKRTVASQMADARQTLLTVQVTVE-------------EATFRASGKRIDFPGFFRAYVEGSDDPDAALEN-----QEVLLPPLALGDTPACQELNAVGHETQPPARFTEATLVKALESEGIGRPSTYASIIGTILDRDYAHLQGNALTPTFTAFAVTEFLEKHFPDLVDTGFTARM 573          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: K9SQT0_9SYNE (DNA topoisomerase 1 n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SQT0_9SYNE)

HSP 1 Score: 202 bits (515), Expect = 6.030e-56
Identity = 121/296 (40.88%), Postives = 161/296 (54.39%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVR-KGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            QALYE G+ITYMRTD   LS++A   A   V   +G+ ++  K    A K KG+QEAHEAIRPA                                  +    P++ GL  ++ +LYDL+++RT+AS MA++     +V +G +             D +FR+SGK   F GF +AY EG DD   A EG     QE  LP ++ G   VC+Q +PV H T PP RYTEAS +K LE++G+GRPSTYASIIGT+  R Y  +   TL P+ T F V  LL EHFP+  D  FT+K+
Sbjct:  310 QALYEQGFITYMRTDSVHLSDQAISAARNCVSQMYGENYLSPKPRQYATKSKGAQEAHEAIRPA---------------------------------GASFRTPQQTGLSGREFSLYDLIWKRTIASQMADARQTMISVQIGVE-------------DAIFRSSGKRIDFAGFFRAYVEGSDDPDAAIEG-----QEIVLPKLIIGDHPVCQQLQPVGHETQPPARYTEASLVKTLESEGIGRPSTYASIIGTICDRGYAQLTHNTLIPTFTAFAVTSLLEEHFPNLVDPSFTSKM 554          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: UPI001EDA1AE5 (type I DNA topoisomerase n=2 Tax=unclassified Rhodohalobacter TaxID=2621813 RepID=UPI001EDA1AE5)

HSP 1 Score: 202 bits (515), Expect = 8.090e-56
Identity = 120/295 (40.68%), Postives = 161/295 (54.58%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVRKGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q LYE GYITYMRTD  +LS +A   A   V   +G+E++ K      K KG+QEAHEAIRPA                             +F HP      E+ GL  +Q  LYDL+++RT+A+ MAE+  +FT V++ A+          +     F++SGK  +F GF +AY EG DD   A E      QE  LP M EG      + + + H T PP RYTEA+ +KELE  GVGRPSTYA+IIGT++ R Y   +G+ L P+ T F V +LL EHFP   D+ FT+++
Sbjct:  312 QKLYENGYITYMRTDSTNLSGQAISAARNEVEKQYGEEYLFKRVRTYGKAKGAQEAHEAIRPA---------------------------GSSFTHP------EKAGLSGRQFKLYDLIWKRTIATQMAEARLEFTNVTISAE---------HDGTKADFKSSGKKILFPGFFRAYVEGSDDPEAAIEN-----QEIYLPEMKEGDATELHELESISHETKPPARYTEATLVKELEKSGVGRPSTYATIIGTIQERGYAKSEGKALVPTYTAFAVTELLEEHFPHVVDSKFTSQL 559          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: UPI001EFFCE5D (type I DNA topoisomerase n=2 Tax=Synechococcus TaxID=1129 RepID=UPI001EFFCE5D)

HSP 1 Score: 202 bits (514), Expect = 1.940e-55
Identity = 123/296 (41.55%), Postives = 160/296 (54.05%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVR-KGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q LYE GYITYMRTD   LS++A   A   V   +G E++  K      K KG+QEAHEAIRPA                                  S+   P +  L  Q+ ALYDL+++RT+AS MAE+    TTV +G +             D VFRASGK   F GF +AY EG DD   A E      +E  LP++ +G    C++ +PV H T PP R+TEAS +K LE++G+GRPSTYA+I+ T+ +R YV   G  L P+ T F V DLL +HFPD  +T FTAK+
Sbjct:  310 QKLYEEGYITYMRTDSVHLSDQAISAARACVSSMYGKEYLSPKPRQYTTKAKGAQEAHEAIRPA---------------------------------GSEFRLPNQTPLSGQELALYDLIWKRTVASQMAEARQTHTTVLIGVE-------------DAVFRASGKRIDFPGFFRAYVEGSDDPDAALED-----REVHLPLLRQGDHPECQKLEPVGHETQPPARFTEASLVKVLESEGIGRPSTYATILNTIVSRGYVKPMGNALVPTYTAFAVTDLLEKHFPDLVNTRFTAKM 554          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A2T2RSE2_9CYAN (DNA topoisomerase 1 n=1 Tax=Cyanobacteria bacterium QH_9_48_43 TaxID=1919126 RepID=A0A2T2RSE2_9CYAN)

HSP 1 Score: 201 bits (512), Expect = 2.910e-55
Identity = 126/296 (42.57%), Postives = 161/296 (54.39%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVR-KGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q+LYE GYITYMRTD   LS +A   +   V+  +G E++  K    + K KG+QEAHEAIRPA                                  +    P+E GL+ ++R+LYDL+++RT+AS MAE+     +V++  +      DAG       FRASGK   F GF +AY EG DD   A E      QE  LP +    T  C Q + V H T PP RYTEAS +K LE++G+GRPSTYASIIGT+  R Y  M+G  L P+ T F V  LL EHFPD  DTGFTA +
Sbjct:  310 QSLYEQGYITYMRTDSVHLSEQAIAASRECVQQKYGKEYLSPKPRQYSTKSKGAQEAHEAIRPA---------------------------------GASFRTPQETGLQGRERSLYDLIWKRTVASQMAEARLTQISVNVKVE------DAG-------FRASGKRIDFAGFFRAYVEGSDDPEAALEN-----QEVILPSLQAEDTPHCTQLEAVAHETQPPARYTEASLVKTLESEGIGRPSTYASIIGTIVDRGYAQMRGSALVPTFTAFAVTSLLEEHFPDLVDTGFTANM 554          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A8J7G7X4_9CYAN (DNA topoisomerase 1 n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7G7X4_9CYAN)

HSP 1 Score: 200 bits (509), Expect = 8.120e-55
Identity = 124/296 (41.89%), Postives = 159/296 (53.72%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVRKGDAK-AVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q+LYE GYITYMRTD  +LS +A   A   V   +G E++     + A K KG+QEAHEAIRPA                                  S    P+E GL++++  LYDL+++RT+A+ MAE      TV +          AG+ E    FRA+GK   F GF +AY EG DD   A E      QE  LP +  G    CE+ +P+ H T PP RYTEAS +K LE +G+GRPSTYASIIGT+  R Y  M   +L P+ T F V  LL +HFPD  DTGFTA++
Sbjct:  310 QSLYEQGYITYMRTDSTNLSQQAIAAARSCVEQMYGREYLSPEPRQYATKAKGAQEAHEAIRPA---------------------------------GSTFRTPQETGLKDRELRLYDLIWKRTVATQMAEVRQTHITVQI---------QAGEAE----FRATGKRIDFAGFFRAYVEGSDDPDAAIED-----QEVILPPLRVGDHPSCEELEPIGHETQPPARYTEASLVKTLENEGIGRPSTYASIIGTIIDRGYAQMINNSLVPTFTAFAVTSLLEKHFPDLVDTGFTARM 554          
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Match: A0A521DC44_9BACT (DNA topoisomerase 1 n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521DC44_9BACT)

HSP 1 Score: 199 bits (507), Expect = 1.050e-54
Identity = 122/299 (40.80%), Postives = 164/299 (54.85%), Query Frame = 0
Query:    1 QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEF----VRKGDAKAVKVKGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDLPQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGDAGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELPVMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV 295
            Q LYE G+ITYMRTD   LS +A G A  AV + +G+++    VR  + K    KG+QEAHEAIRPA                                  S   +PE+ GL  ++  LYDL+++RT+A+ MAE+E +FT V++ A          +   D  FRA GK  +F G+ +AY EG DD   A E      QE  LP M EG +   +    V H T PP R+TEA+ +KELE +GVGRPSTYASII T++ R Y   +G+TL P+ T F V+ LL +HFPD  D+ FT+ +
Sbjct:  312 QKLYEKGFITYMRTDSTRLSGQAIGAARDAVTEEYGEDYLFERVRNYNKKG---KGAQEAHEAIRPA---------------------------------GSRFVKPEKAGLSGREFKLYDLIWKRTIATQMAEAELEFTNVTIRAT---------NNGTDADFRAGGKKILFPGYFRAYVEGSDDPEAALEN-----QENFLPAMNEGDSTELDDLNFVSHETKPPARFTEATLVKELEKRGVGRPSTYASIISTIQDRGYAKSEGKTLIPTFTAFAVSTLLEKHFPDLVDSDFTSSL 560          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11380.1227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDU2_ECTSI3.110e-13271.92DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5KCV2_9PHAE9.470e-12769.69TOP1Ac domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2T4XF30_9BACT2.380e-5841.47DNA topoisomerase 1 n=1 Tax=Bacteroidetes bacteriu... [more]
A0A0M2PVX9_PROHO1.010e-5641.22DNA topoisomerase 1 n=1 Tax=Prochlorothrix holland... [more]
K9SQT0_9SYNE6.030e-5640.88DNA topoisomerase 1 n=1 Tax=Synechococcus sp. PCC ... [more]
UPI001EDA1AE58.090e-5640.68type I DNA topoisomerase n=2 Tax=unclassified Rhod... [more]
UPI001EFFCE5D1.940e-5541.55type I DNA topoisomerase n=2 Tax=Synechococcus Tax... [more]
A0A2T2RSE2_9CYAN2.910e-5542.57DNA topoisomerase 1 n=1 Tax=Cyanobacteria bacteriu... [more]
A0A8J7G7X4_9CYAN8.120e-5541.89DNA topoisomerase 1 n=2 Tax=Pseudanabaenales TaxID... [more]
A0A521DC44_9BACT1.050e-5440.80DNA topoisomerase 1 n=1 Tax=Gracilimonas mengyeens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPRINTSPR00417PRTPISMRASEIcoord: 239..253
score: 60.68
coord: 6..15
score: 68.54
coord: 115..131
score: 39.71
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 1..294
e-value: 1.5E-50
score: 172.4
IPR003602DNA topoisomerase, type IA, DNA-binding domainSMARTSM00437topIaneu2coord: 1..276
e-value: 2.3E-37
score: 140.1
IPR013826DNA topoisomerase, type IA, central region, subdomain 3GENE3D1.10.290.10coord: 1..129
e-value: 2.0E-18
score: 69.2
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 194..295
e-value: 3.2E-27
score: 97.3
IPR000380DNA topoisomerase, type IAPANTHERPTHR42785FAMILY NOT NAMEDcoord: 102..294
coord: 1..64
IPR023406DNA topoisomerase, type IA, active sitePROSITEPS00396TOPOISOMERASE_I_PROKcoord: 1..15
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 1..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11380contigH-canaliculatus_F_contig11380:331..3603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11380.1227.1mRNA_H-canaliculatus_F_contig11380.1227.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11380 331..3603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11380.1227.1 ID=prot_H-canaliculatus_F_contig11380.1227.1|Name=mRNA_H-canaliculatus_F_contig11380.1227.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=295bp
QALYEAGYITYMRTDRPSLSNEAAGVAELAVRDSFGDEFVRKGDAKAVKV
KGSQEAHEAIRPALITGGAPVGAGAAVSATKTSATTETLSAGAFLHPSDL
PQPEEGGLEEQQRALYDLVYRRTLASAMAESEADFTTVSLGADGISAGGD
AGDEEVDVVFRASGKTTVFEGFLKAYSEGPDDALPATEGVTWDAQETELP
VMVEGGTVVCEQAKPVPHRTSPPRRYTEASFIKELEAKGVGRPSTYASII
GTLRTRTYVNMQGRTLTPSLTGFVVADLLREHFPDFTDTGFTAKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023405Topo_IA_core_domain
IPR023406Topo_IA_AS
IPR000380Topo_IA
IPR013824Topo_IA_cen_sub1
IPR013826Topo_IA_cen_sub3
IPR003602Topo_IA_DNA-bd_dom
IPR013497Topo_IA_cen