prot_H-canaliculatus_F_contig11362.1214.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11362.1214.1
Unique Nameprot_H-canaliculatus_F_contig11362.1214.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length212
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11362.1214.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.640e-117
Identity = 195/212 (91.98%), Postives = 201/212 (94.81%), Query Frame = 0 
Query:    3 QENLARIARYGVAGGADSKLAGHLSSVLGLQMPTAAAGTASKYGAQNIRRFLTHVHAVSIAPPWVSALLTAMRVPTKNAVQVKKVIEEAIEVNKVLSTPKAVLQAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTL---CRALVRYLATAPESMAFRRPVDTTVFTDYHNFVEDPCDLRTIDRRLEASE 211
            QENLARIARYGVAGG DS+  G LSSVLGLQMP+AAAGTASKYGAQNIRRFL HVHA+SIAPPWV+ALLTAMRVPTKNAVQVKKVI+EAIEVNK LSTPK VL+AMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTL   CRALVRYLATAPESMAFRRPVDTTVFTDYH FVEDPCDLRTIDRRLEASE
Sbjct:  580 QENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRRFLAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVIQEAIEVNKGLSTPKPVLEAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTLLPMCRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEASE 791
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BLAST of mRNA_H-canaliculatus_F_contig11362.1214.1 vs. uniprot
Match: A0A6H5J6B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 7.470e-16
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:    3 QENLARIARYGVAGGADSKLAGHLSSVLGLQMPTAAAGTASKYGAQNIRR 52
            QENLARIARYGVAGG DS+  G LSSVLGLQMP+AAAGTASKYGAQNIRR
Sbjct:  744 QENLARIARYGVAGGGDSRFGGQLSSVLGLQMPSAAAGTASKYGAQNIRR 793
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11362.1214.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.840e-13
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:  176 MAFRRPVDTTVFTDYHNFVEDPCDLRTIDRRLEASE 211
            MAFRRPVDTTVFTDYH FVEDPCDLRTIDRRLEASE
Sbjct:    1 MAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEASE 36
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11362.1214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5K5_ECTSI1.640e-11791.98Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J6B9_9PHAE7.470e-1688.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8B2_9PHAE3.840e-1397.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 162..210
e-value: 2.9E-8
score: 33.7
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 170..211
score: 10.07
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 159..211
e-value: 4.9E-9
score: 37.8
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 160..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11362contigH-canaliculatus_F_contig11362:188..3679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11362.1214.1mRNA_H-canaliculatus_F_contig11362.1214.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11362 188..3679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11362.1214.1 ID=prot_H-canaliculatus_F_contig11362.1214.1|Name=mRNA_H-canaliculatus_F_contig11362.1214.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=212bp
MLQENLARIARYGVAGGADSKLAGHLSSVLGLQMPTAAAGTASKYGAQNI
RRFLTHVHAVSIAPPWVSALLTAMRVPTKNAVQVKKVIEEAIEVNKVLST
PKAVLQAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELG
PGDEPLLPGTLCRALVRYLATAPESMAFRRPVDTTVFTDYHNFVEDPCDL
RTIDRRLEASE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain