prot_H-canaliculatus_F_contig10891.831.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10891.831.1
Unique Nameprot_H-canaliculatus_F_contig10891.831.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length111
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10891.831.1 vs. uniprot
Match: A0A6H5JJP7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJP7_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.500e-26
Identity = 68/112 (60.71%), Postives = 79/112 (70.54%), Query Frame = 0 
Query:    3 QFSLTFLAVLAILGSALGFQQVAPHGAPSTASSRFGGLSLQ---GSSFAARPLRASATGAPAAAXXXTASSRASGNSRRRQWVSMQFGEGGGPIEKGTMPSYEEEQEKAFFN 111
            Q+SL FLAV+A+LGS LGFQ VAP G P+   SR  G+S      SSF ARP+ A+A G         A+ RAS + RR+Q  SMQFGEGGGPIEKGTMPSYEEEQ+KAFFN
Sbjct:    2 QYSLVFLAVVAMLGSVLGFQ-VAPRGLPTA--SRCSGVSTSPRASSSFTARPVAATAAGG--------AAPRASAHKRRQQRFSMQFGEGGGPIEKGTMPSYEEEQDKAFFN 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10891.831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJP7_9PHAE1.500e-2660.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10891contigH-canaliculatus_F_contig10891:1719..4474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10891.831.1mRNA_H-canaliculatus_F_contig10891.831.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10891 1719..4474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10891.831.1 ID=prot_H-canaliculatus_F_contig10891.831.1|Name=mRNA_H-canaliculatus_F_contig10891.831.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=111bp
MQQFSLTFLAVLAILGSALGFQQVAPHGAPSTASSRFGGLSLQGSSFAAR
PLRASATGAPAAAAGATASSRASGNSRRRQWVSMQFGEGGGPIEKGTMPS
YEEEQEKAFFN
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