prot_H-canaliculatus_F_contig1085.801.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1085.801.1
Unique Nameprot_H-canaliculatus_F_contig1085.801.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length62
Homology
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 3.590e-26
Identity = 55/62 (88.71%), Postives = 60/62 (96.77%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MIIATEIGDKTFFIAAIMAMS+ RLAVFGGA+GALAVMTVLSAALG+ALP+ LP+TYTHYAS
Sbjct:   58 MIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYAS 119          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A6H5KTH0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.510e-25
Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MIIATEIGDKTFFIAAIMAMS+ RLAVFGGAIGALAVMTVLSAALG+ALP+ L +TYTHYAS
Sbjct:   58 MIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYAS 119          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.490e-22
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYA 61
            MIIATEIGDKTFFIAAIMAM YSR+ VF GAI ALA+MTVLSAALGFALP+ LP+ YTHYA
Sbjct:  102 MIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYA 162          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 95.5 bits (236), Expect = 2.050e-22
Identity = 47/62 (75.81%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MI+ATE+GDKTFFIAAI+AM +SR  +FGGAIGALA+MTVLS  +GFALPS +P+TYTHYAS
Sbjct:   74 MIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYAS 135          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A7S1CD49_9STRA (GDT1 family protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD49_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.550e-22
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MII TE+GDKTFFIAAI+AM Y R  VFGGAIGALA+MT LSAA+G+ALP+ LPKTYTHYA+
Sbjct:  139 MIIVTELGDKTFFIAAILAMQYDRAPVFGGAIGALALMTALSAAIGWALPAILPKTYTHYAA 200          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A8J2SNL4_9STRA (GDT1 family protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNL4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.700e-21
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MI ATE+GDKTFFIAAI+AM ++RL VF GA+GALAVMTVLSA LG ALPS LP+TYTHYAS
Sbjct:   92 MIWATEVGDKTFFIAAILAMRHARLVVFAGALGALAVMTVLSALLGLALPSLLPRTYTHYAS 153          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A0D2J2K1_9CHLO (GDT1 family protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2J2K1_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 3.170e-21
Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    4 ATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            A+EIGDKTFFIAAIMAM + RL VFGGAIGALAVMTVL+ ALG+A P+ +PK YTHYA+
Sbjct:   43 ASEIGDKTFFIAAIMAMRHPRLTVFGGAIGALAVMTVLAVALGWAAPALIPKVYTHYAA 101          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 90.9 bits (224), Expect = 4.060e-21
Identity = 46/62 (74.19%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MI ATEIGDKTFFIAAI+AM ++RL +F GA+ ALAVMTVLSAA+G+ALP+ +P+TYTHYAS
Sbjct:   11 MIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYAS 72          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.780e-20
Identity = 46/62 (74.19%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MII TEIGDKTFFIAA++AM +SR A+F GA+ ALA+MTVLSAA+GFALP+ LP+ YTHYAS
Sbjct:  126 MIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYAS 187          
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Match: A0A7S3LNU4_9STRA (GDT1 family protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNU4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.580e-20
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALPSFLPKTYTHYAS 62
            MII TE+GDKTFFIAAIMAM + R+ V+ GAIGAL VMT+LSA +GFALP+ LPK YTHYA+
Sbjct:  141 MIIVTELGDKTFFIAAIMAMKHKRILVYSGAIGALTVMTILSAMIGFALPTLLPKIYTHYAA 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1085.801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN76_ECTSI3.590e-2688.71GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTH0_9PHAE5.510e-2588.71GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CAP1_9STRA1.490e-2283.61GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3UU97_HETAK2.050e-2275.81GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S1CD49_9STRA9.550e-2277.42GDT1 family protein n=1 Tax=Bicosoecida sp. CB-201... [more]
A0A8J2SNL4_9STRA1.700e-2179.03GDT1 family protein n=2 Tax=Pelagomonas calceolata... [more]
A0A0D2J2K1_9CHLO3.170e-2176.27GDT1 family protein n=1 Tax=Monoraphidium neglectu... [more]
F0Y333_AURAN4.060e-2174.19GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A7S2HJF0_9STRA4.780e-2074.19GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
A0A7S3LNU4_9STRA5.580e-2072.58GDT1 family protein n=2 Tax=Aplanochytrium stocchi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 1..62
e-value: 3.8E-19
score: 68.8
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 1..62
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 6..15
NoneNo IPR availablePANTHERPTHR12608:SF1TRANSMEMBRANE PROTEIN 165coord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..62
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1085contigH-canaliculatus_F_contig1085:29714..30163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1085.801.1mRNA_H-canaliculatus_F_contig1085.801.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1085 29684..30163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1085.801.1 ID=prot_H-canaliculatus_F_contig1085.801.1|Name=mRNA_H-canaliculatus_F_contig1085.801.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=62bp
MIIATEIGDKTFFIAAIMAMSYSRLAVFGGAIGALAVMTVLSAALGFALP
SFLPKTYTHYAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1