prot_H-canaliculatus_F_contig1084.792.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1084.792.1
Unique Name	prot_H-canaliculatus_F_contig1084.792.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	261

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1084.792.1 vs. uniprot
Match: D8LJM0_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM0_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.500e-91
Identity = 145/192 (75.52%), Postives = 172/192 (89.58%), Query Frame = 0

Query:    1 LKSRKDSRVFADKWGPGMLALGLFAAIVTVLVMQIVDYIKANDKPEVSVPGVSEAVTHAQNFFFDGVDYIPSETSRNAALVKMASELKSFSPDRAYEFSNLSDGRPTKRVRRKTEYIVASGSTSDIASLPHGEAVLVSAQEELYVYPGSDTGTFDLFMEFYNTASVDFVGPYATSTYSGNDETTVRLGIRCV 192
            LKSRKDSRVFADKWGPGMLALGLFAAIVTVLVMQ++DYI A D P VSV GVS+AV HAQ++ +DGV Y P+  SRNAALVK+ASEL SFSP +AYEFSNLS+GRPTKR+R++ EYIVASGSTSD+ SLPHGEAVLV+AQEE++++PG++TGTFD+ MEFYNTASVDFVGPYATS ++G++ETT+R G  CV
Sbjct:  167 LKSRKDSRVFADKWGPGMLALGLFAAIVTVLVMQVLDYIDATDTPSVSVAGVSDAVAHAQDYSYDGVVYTPTGISRNAALVKLASELNSFSPSKAYEFSNLSNGRPTKRLRKREEYIVASGSTSDLTSLPHGEAVLVTAQEEVFMFPGANTGTFDVAMEFYNTASVDFVGPYATSAFTGDEETTIR-GAMCV 357

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1084.792.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1084.792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LJM0_ECTSI	1.500e-91	75.52	Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..261
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..36
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1084	contig	H-canaliculatus_F_contig1084:21507..24772 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1084.792.1	mRNA_H-canaliculatus_F_contig1084.792.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1084 21507..24772 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1084.792.1 ID=prot_H-canaliculatus_F_contig1084.792.1|Name=mRNA_H-canaliculatus_F_contig1084.792.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=261bp
LKSRKDSRVFADKWGPGMLALGLFAAIVTVLVMQIVDYIKANDKPEVSVP
GVSEAVTHAQNFFFDGVDYIPSETSRNAALVKMASELKSFSPDRAYEFSN
LSDGRPTKRVRRKTEYIVASGSTSDIASLPHGEAVLVSAQEELYVYPGSD
TGTFDLFMEFYNTASVDFVGPYATSTYSGNDETTVRLGIRCVSADGDSFT
GTPGWLAAVEGASGTIPTPSSETTLAAYFQNVGTALSTHLGTSSYEFTSA
GTVYVWSAAFD