prot_H-canaliculatus_F_contig1078.732.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1078.732.1
Unique Nameprot_H-canaliculatus_F_contig1078.732.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length229
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1078.732.1 vs. uniprot
Match: A0A6H5JJ81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ81_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 6.260e-20
Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 0 
Query:    1 MRTTMTPLFFLAATALLPYGFDAFVILPAATSTRARGGNVSK---NMANAPTAEAIQERENARAALLESGGVDELMKMLTELRNDGSE 85
            M+TTMT LF LAA ALLP+G +AFV++PAATS   RGG V++    +  +PTAEA+Q+RE+ARAALLESGGVDEL++ +  +R + SE
Sbjct:    1 MKTTMTSLFSLAAAALLPWGHNAFVVVPAATSFGGRGGTVARLDSRIRASPTAEALQQREDARAALLESGGVDELLRKIAIMRGEESE 88
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BLAST of mRNA_H-canaliculatus_F_contig1078.732.1 vs. uniprot
Match: D7FWQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ9_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.690e-18
Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:    5 MTPLFFLAATALLPYGFDAFVILPAATSTRARGGNV----SKNMANAPTAEAIQERENARAALLESGGVDELMKMLTELRNDGSE 85
            MTPLF LAA ALLP+G +AFVI+PAATS   RGGNV    S+  AN PTAEA+Q+RE+ARAALLESGGVDEL++ +  +R +  E
Sbjct:    1 MTPLFSLAAAALLPWGHNAFVIVPAATSLGGRGGNVARPESRIRAN-PTAEALQQREDARAALLESGGVDELLRKIAIMRGEEIE 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1078.732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJ81_9PHAE6.260e-2059.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ9_ECTSI1.690e-1863.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.726
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1078contigH-canaliculatus_F_contig1078:13802..16355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1078.732.1mRNA_H-canaliculatus_F_contig1078.732.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1078 13802..16355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1078.732.1 ID=prot_H-canaliculatus_F_contig1078.732.1|Name=mRNA_H-canaliculatus_F_contig1078.732.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=229bp
MRTTMTPLFFLAATALLPYGFDAFVILPAATSTRARGGNVSKNMANAPTA
EAIQERENARAALLESGGVDELMKMLTELRNDGSEGEEGAPTAAAAPAAA
AAAVATSPSAKEAAPAAAAPIPPKAEAMLAPPEAEAAPASPKAEAAPAPP
KAEAAPAPPKAEAAPAPPKVEEAPAPSATEAAPSPPKAVAAPPAAPAPVA
APPLKKKKKLRGKKKAAAAAAAAAAQDA*
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