prot_H-canaliculatus_F_contig1075.710.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1075.710.1
Unique Nameprot_H-canaliculatus_F_contig1075.710.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length273
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1075.710.1 vs. uniprot
Match: A0A6H5JU55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU55_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 8.150e-44
Identity = 108/245 (44.08%), Postives = 136/245 (55.51%), Query Frame = 0 
Query:   25 PVGD--WWFVRLESIATPLLRPNAVADVGLAFRCVYMAVHIGEPLPLRRTRGTAWCVEDTVVDACGGTCPVREHGPAQAGRLRGREGMAEVGGRNKALLTPGARATRGDLATTSTPSTTERRTPVEVVGSSGAPSSAGISTGGSGT-RSRCILSELSALRRQSSSACPSSAGSSSYAHRGVHTTLQGLLNMCTAVHYKSNGCPGPLSQTGSCSGRSDHFIFSAECDSCGAIFGRVTTERPDPKSI 266
            PV D  WW VRLES+ +P+L+P   A+VGLAFRC   A+HIGEPLP R + G+AW   D VV     TCPV EHGP+Q+   RGR  +    GR   ++TPGA       A  +TPS+ E                 G  +G  G  RS    S+    RR    + P    S S  H GV  ++ GLLNM  AVH KS GCPGPL      +GRSD+  FSAEC +CGA+FGR+  E+PD K++
Sbjct:  386 PVQDSEWWCVRLESVVSPILKPGVEAEVGLAFRCECDALHIGEPLPTRVSTGSAWTSADPVVKIWRTTCPVVEHGPSQS-LTRGRRRV----GRADPIVTPGA-------ARRTTPSSGEE---------------VGTGSGARGVLRSTPSTSDTGESRRAQEYSRPKPKDSESNNHVGVPVSVSGLLNMLGAVHKKSCGCPGPLINPSLGAGRSDYESFSAECRTCGAVFGRLPVEKPDSKAL 603
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1075.710.1 vs. uniprot
Match: A0A6H5J8W1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8W1_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.620e-23
Identity = 86/248 (34.68%), Postives = 106/248 (42.74%), Query Frame = 0 
Query:   19 RSLRAAPVGDWWFVRLESIATPLLRPNAVADVGLAFRCVYMAVHIGEPLPLRRTRGTAWCVEDTVVDACGGTCPVREHGPAQAGRLRGREGMAEVGGRNKALLTPGARATRGDLATTSTPSTTERRTPVEVVGSSGAPSSAGISTGGSGTRSRCILSELSALRRQSSSACPSSAGSSSYAHRGVHTTLQGLLNMCTAVHYKSNGCPGPLSQTGSCSGRSDHFIFSAECDSCGAIFGRVTTERPDPKSI 266
            R   +  +GDW +VRLES+A+P L P    +VGLAF C   AVH+GEPLP RR +G  W   ++VV+  G  CPVRE G A   R   R G+                      +  S P      TP+       A S AG   G S   SR                   SAG       G  T   G L+   +   +  GCPGPL        RSD   FSA C  CGAIFG +   +P+ KSI
Sbjct:  315 RCQESVRIGDWEYVRLESLASPFLFPGVAPEVGLAFSCSCGAVHLGEPLPERRKQGVVWSSANSVVEVLGHQCPVRETGYADH-RRASRGGVPAGSPXXXXXXXXXXXXXXRHESDGSAPDGDALDTPI-------ARSRAGPVWGASEDDSR-----------------GGSAG-------GTRTRSGGGLSSRASGDRQDTGCPGPLINAVLSRARSDFEAFSAGCRECGAIFGHIPVSKPNAKSI 530
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1075.710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU55_9PHAE8.150e-4444.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8W1_9PHAE1.620e-2334.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1075contigH-canaliculatus_F_contig1075:37..1127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1075.710.1mRNA_H-canaliculatus_F_contig1075.710.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1075 2..1193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1075.710.1 ID=prot_H-canaliculatus_F_contig1075.710.1|Name=mRNA_H-canaliculatus_F_contig1075.710.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=273bp
MGETGKRGKGESEKKNSERSLRAAPVGDWWFVRLESIATPLLRPNAVADV
GLAFRCVYMAVHIGEPLPLRRTRGTAWCVEDTVVDACGGTCPVREHGPAQ
AGRLRGREGMAEVGGRNKALLTPGARATRGDLATTSTPSTTERRTPVEVV
GSSGAPSSAGISTGGSGTRSRCILSELSALRRQSSSACPSSAGSSSYAHR
GVHTTLQGLLNMCTAVHYKSNGCPGPLSQTGSCSGRSDHFIFSAECDSCG
AIFGRVTTERPDPKSIRRTGRV*
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