prot_H-canaliculatus_F_contig10609.592.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10609.592.1
Unique Nameprot_H-canaliculatus_F_contig10609.592.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length228
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10609.592.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 6.930e-58
Identity = 123/205 (60.00%), Postives = 144/205 (70.24%), Query Frame = 0 
Query:   29 NREKVHERLRLGGTCRFKSHLYHTLLHYKLYLVCKIREHMDKTMVGPEALRQGLWAQQKWDDEKTAIDQLVKRAKVMANMKTNREYWREGTWEKMKAIRMWLYIPLFIVAEQEAKNNRRINVDQLDEVHSSASNGSDGXXXXXXXXXXXXXSRAPCDRPKASAGGRGRARRG---------RYGEEMSSESQEWDTLSDFIVDDD 224
            +++KV ERL LGG CR+KSHLYHTLLHYKLYLVCK+REHMD T VGPE LR+G WA+QKWDDEK AIDQLV +A+ MANMKT +EYWRE TW +MKAIR WLY+PL IV EQEAK++ R  +DQLDE              XXXXXX     R P    +A AG  G+A RG         RY +++SS S E D +SDFIVDDD
Sbjct: 1068 SKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHMDTTGVGPEDLRKGEWAEQKWDDEKLAIDQLVGKAEYMANMKTFKEYWREETWAEMKAIRKWLYVPLRIVYEQEAKHDCRTKLDQLDEXXXXXX--------XXXXXXSGSRGRLPRGSQRAGAGA-GKAVRGXXXXXXXXGRYQDDVSSGSAEPDNMSDFIVDDD 1263
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10609.592.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.840e-8
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 
Query:    5 QLWTRSRWDKLLPKGWDSAAATRANREKVHERLRLGGTCRFKSHLYHTLLHYKLYLVCKI 64
            ++W   RWDK LP+ WD   A    +++      LG TC+ KSHL+H+L HYKLYLV K+
Sbjct:   58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKV 117
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10609.592.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 4.950e-8
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 
Query:    5 QLWTRSRWDKLLPKGWDSAAATRANREKVHERLRLGGTCRFKSHLYHTLLHYKLYLVCKI 64
            ++W   RWDK LP+ WD   A    +++      LG TC+ KSHL+H+L HYKLYLV K+
Sbjct:  777 RVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKV 836
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10609.592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLB0_ECTSI6.930e-5860.00RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
D7G8T8_ECTSI1.840e-846.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKK5_9PHAE4.950e-846.67DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10609contigH-canaliculatus_F_contig10609:167..2295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10609.592.1mRNA_H-canaliculatus_F_contig10609.592.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10609 167..2295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10609.592.1 ID=prot_H-canaliculatus_F_contig10609.592.1|Name=mRNA_H-canaliculatus_F_contig10609.592.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=228bp
MLCAQLWTRSRWDKLLPKGWDSAAATRANREKVHERLRLGGTCRFKSHLY
HTLLHYKLYLVCKIREHMDKTMVGPEALRQGLWAQQKWDDEKTAIDQLVK
RAKVMANMKTNREYWREGTWEKMKAIRMWLYIPLFIVAEQEAKNNRRINV
DQLDEVHSSASNGSDGSSSSGGGGGGGSSSRAPCDRPKASAGGRGRARRG
RYGEEMSSESQEWDTLSDFIVDDDVSE*
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