prot_H-canaliculatus_F_contig10589.567.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10589.567.1
Unique Nameprot_H-canaliculatus_F_contig10589.567.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length107
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10589.567.1 vs. uniprot
Match: D8LIV0_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV0_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.010e-49
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MESFKESENACDGPSCSSYYLTTLNEESMACESTGIMTILAWVFGIFFGVTEMTGHFLRAYYGSTGVGLRGHQHHQGWEFHTGRLIEACLAKVTRTAGRTP--HER 104
            M+ F+ES NAC+ PSCS YYLT L+ E+M C+STGIMTIL WVFG+FFG+TEM GHFLRAYYG TGVGLRGH+HHQGWEFHTGRLIEACL K TR+AG +P  HER
Sbjct:  387 MQRFQESYNACEDPSCSYYYLTNLDNETMTCKSTGIMTILVWVFGMFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIEACLGKATRSAGLSPPHHER 492
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BLAST of mRNA_H-canaliculatus_F_contig10589.567.1 vs. uniprot
Match: A0A6H5KZM9_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM9_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 5.730e-46
Identity = 81/113 (71.68%), Postives = 92/113 (81.42%), Query Frame = 0 
Query:    1 MESFKESENACDGPSCSSYYLTTL-------NEESMACESTGIMTILAWVFGIFFGVTEMTGHFLRAYYGSTGVGLRGHQHHQGWEFHTGRLIEACLAKVTRTAGRTP--HER 104
            M+ F+ES NAC+ PSCSSYYLT L       ++E+M C+STGIMTIL WVFGIFFG+TEM GHFLRAYYG TGVGLRGH+HHQGWEFHTGRLIEACL K TR+AG +   HER
Sbjct:  690 MQRFRESYNACEDPSCSSYYLTALVAAGANLDDETMTCKSTGIMTILVWVFGIFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIEACLGKATRSAGLSQLHHER 802
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10589.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIV0_ECTSI2.010e-4975.47Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KZM9_9PHAE5.730e-4671.68Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..106
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10589contigH-canaliculatus_F_contig10589:1495..3555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10589.567.1mRNA_H-canaliculatus_F_contig10589.567.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10589 95..3745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10589.567.1 ID=prot_H-canaliculatus_F_contig10589.567.1|Name=mRNA_H-canaliculatus_F_contig10589.567.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=107bp
MESFKESENACDGPSCSSYYLTTLNEESMACESTGIMTILAWVFGIFFGV
TEMTGHFLRAYYGSTGVGLRGHQHHQGWEFHTGRLIEACLAKVTRTAGRT
PHEREN*
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