prot_H-canaliculatus_F_contig10533.515.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig10533.515.1
Unique Name	prot_H-canaliculatus_F_contig10533.515.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	65

Homology

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BLAST of mRNA_H-canaliculatus_F_contig10533.515.1 vs. uniprot
Match: A0A6H5JD21_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD21_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.070e-25
Identity = 46/60 (76.67%), Postives = 57/60 (95.00%), Query Frame = 0

Query:    1 FDSFTGFVGGICAVPLALVYPLLFHLSLFGDLDTPRQKALHWGLLVGGVLAGVASTAVAL 60
            FDSFTG VGG+C+VPLALVYP+LFH+SLFG+LD+PR++A+HW LLVGGVL+GVAST VA+
Sbjct:  392 FDSFTGIVGGLCSVPLALVYPMLFHMSLFGELDSPRKQAMHWVLLVGGVLSGVASTVVAM 451

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BLAST of mRNA_H-canaliculatus_F_contig10533.515.1 vs. uniprot
Match: D7FZM6_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM6_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 5.620e-25
Identity = 46/60 (76.67%), Postives = 57/60 (95.00%), Query Frame = 0

Query:    1 FDSFTGFVGGICAVPLALVYPLLFHLSLFGDLDTPRQKALHWGLLVGGVLAGVASTAVAL 60
            FDSFTG VGG+C+VPLALVYP+LFH+SLFG+LD+PR++A+HW LLVGGVL+GVAST VA+
Sbjct:  553 FDSFTGIVGGLCSVPLALVYPMLFHMSLFGELDSPRKQAMHWVLLVGGVLSGVASTVVAM 612

[Close]

BLAST of mRNA_H-canaliculatus_F_contig10533.515.1 vs. uniprot
Match: A0A517L3Q2_9PEZI (Aa_trans domain-containing protein n=4 Tax=Venturia TaxID=5024 RepID=A0A517L3Q2_9PEZI)

HSP 1 Score: 53.9 bits (128), Expect = 8.470e-7
Identity = 23/59 (38.98%), Postives = 34/59 (57.63%), Query Frame = 0

Query:    1 FDSFTGFVGGICAVPLALVYPLLFHLSLFGDLDTPRQKALHWGLLVGGVLAGVASTAVA 59
            FD     +G +C   + ++ PL FHL LFG+  T R+K L+W +L+   + GV ST  A
Sbjct:  594 FDRIMTLMGSLCGFTVCIILPLAFHLKLFGNELTKREKFLNWFMLIASSIMGVVSTVFA 652

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10533.515.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10533.515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JD21_9PHAE	3.070e-25	76.67	Aa_trans domain-containing protein n=1 Tax=Ectocar...	[more]
D7FZM6_ECTSI	5.620e-25	76.67	Aa_trans domain-containing protein n=1 Tax=Ectocar...	[more]
A0A517L3Q2_9PEZI	8.470e-7	38.98	Aa_trans domain-containing protein n=4 Tax=Venturi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..39
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 62..64
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 40..61
None	No IPR available	TMHMM	TMhelix		coord: 39..61
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig10533	contig	H-canaliculatus_F_contig10533:4425..4619 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig10533.515.1	mRNA_H-canaliculatus_F_contig10533.515.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig10533 4425..4619 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig10533.515.1 ID=prot_H-canaliculatus_F_contig10533.515.1|Name=mRNA_H-canaliculatus_F_contig10533.515.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=65bp
FDSFTGFVGGICAVPLALVYPLLFHLSLFGDLDTPRQKALHWGLLVGGVL
AGVASTAVALVKLL*