prot_H-canaliculatus_F_contig10529.511.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10529.511.1
Unique Nameprot_H-canaliculatus_F_contig10529.511.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length314
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10529.511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 228..261
e-value: 1.0E-5
score: 23.4
coord: 116..148
e-value: 3.1E-4
score: 18.7
coord: 46..78
e-value: 2.2E-10
score: 38.0
coord: 151..185
e-value: 1.0E-4
score: 20.2
coord: 11..43
e-value: 1.3E-5
score: 23.0
coord: 262..295
e-value: 3.9E-8
score: 31.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 43..87
e-value: 6.6E-11
score: 42.2
coord: 148..192
e-value: 2.2E-9
score: 37.4
coord: 259..305
e-value: 1.0E-10
score: 41.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 117..146
e-value: 0.0038
score: 17.4
coord: 11..41
e-value: 4.1E-5
score: 23.6
coord: 228..257
e-value: 0.0066
score: 16.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 12.145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 10.885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 8.561
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 79..113
score: 7.947
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 10.918
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 114..148
score: 8.999
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 12.474
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..93
e-value: 2.7E-27
score: 97.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 94..216
e-value: 1.0E-31
score: 112.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 217..314
e-value: 2.3E-28
score: 101.5
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 1..49
coord: 40..159
coord: 146..311
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10529contigH-canaliculatus_F_contig10529:237..4636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10529.511.1mRNA_H-canaliculatus_F_contig10529.511.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10529 228..4636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10529.511.1 ID=prot_H-canaliculatus_F_contig10529.511.1|Name=mRNA_H-canaliculatus_F_contig10529.511.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=314bp
MRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRNDGILPVTVTYNT
VISACGKSGQWSLAVSLLDEMSDLGCPPGPVTFASAMLACERARQWHHVL
RIMDQMQEDGVWVDKYAYTTAIHAAGQLGKWARCVQYLDEMDENGVAKDV
VTVSAAISACADKGQWAQAEKLMEGMLEDGLTPNVITYTSLMVVLRRGGQ
QEKAIRILDLMKAEARSSEHGVKPNVRSYSVAIAACADVKEWQRALALMN
EMEREGVPPNEVSYNTAIRACGDAGQLSEALSLMDEMEAKGVKASVVTYG
TAVAACQRKADWKM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat