prot_H-canaliculatus_F_contig10424.435.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10424.435.1
Unique Nameprot_H-canaliculatus_F_contig10424.435.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length290
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10424.435.1 vs. uniprot
Match: D8LDI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI2_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.950e-11
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    1 MASDQQAEVGWTPPRAPAAPRQLSGSSPGSSRGKLRSEYQ 40
            MA+D+Q E+GWTPPRAPA  R+LSGSSPGSSRGKLRSEYQ
Sbjct:    1 MAADRQGELGWTPPRAPAVSRRLSGSSPGSSRGKLRSEYQ 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10424.435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDI2_ECTSI3.950e-1182.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10424contigH-canaliculatus_F_contig10424:825..2557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10424.435.1mRNA_H-canaliculatus_F_contig10424.435.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10424 825..2557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10424.435.1 ID=prot_H-canaliculatus_F_contig10424.435.1|Name=mRNA_H-canaliculatus_F_contig10424.435.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=290bp
MASDQQAEVGWTPPRAPAAPRQLSGSSPGSSRGKLRSEYQARARLGGMTI
KKRRSGALKFSANTTDRRPSAAAAAAAAATGDSWGCPPSPKAGRGASERA
PPPPPPPRRGSHQTSLLDFCHDSSVAPPPPPQQQQQKQQKQQQQPARGAA
PGFGLLVPPGEPTMVAASPPGMPQEQQQQQAVSDSAVMDMDTSEDFADDG
DDDERSDRGQQEPQPTPFVQSSSSSGSSSTVRTPAASPAPGRPATVTPPT
QSPSDSLGLLGGGAAAALSSRNGGGASPAGGGGGGGGEIG
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