prot_H-canaliculatus_F_contig10240.255.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10240.255.1
Unique Nameprot_H-canaliculatus_F_contig10240.255.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length420
Homology
BLAST of mRNA_H-canaliculatus_F_contig10240.255.1 vs. uniprot
Match: D8LDG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG0_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 8.610e-41
Identity = 168/475 (35.37%), Postives = 197/475 (41.47%), Query Frame = 0
Query:   10 KTSTLSDWAKETGGGGGSVRGRLPPVPVKVEVVSRADWDPAGIRPKSMKEEDAAGTKGAAA------------------------------AGPVRERVQIPPLQADVFASAMPYGRGRQSPLPLVGSRTSGPGLLQ----QPLCVPLSLSLSFSFVVLDGNTPLWSRVLPPPSLPSEAFPFFWRGGDATGARAHTHXXXXMRTHSCTPAASTLRNASTKLASSSPSKCTKPNAAAAGSAAGSATKEI-----------------------ERPTKEGAXXXXXXAAP-------EVVGGGDEDSGLFELAYAIAHDGGGVVKCRWAPDGSSDRGVGVDAAXXXXXXXXXXXREDSEALGLLAAIFYDGSLRVYVCPDPDEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVVLKTKPVLHAQLKQAQLQCLDWSPHDANLLLAGASDG 420
            K S+ +DWAKETGGGGG  RG LP  PVKVE+V +  WD AGI+P                                              A P R RVQIPPL+ADVF+S +PY  G+ SPLPLVG RT+GP LLQ    + +C  L+                       PS P +        G AT       XXXX        A +  ++   +  +    K  +P  A A +                                ER   E A   XXX          E V GG   S +FELAY IAHDGGGVVKC+WAPDGS+  G                   D  ALGL  A    GSL VYVCPDPD V                                  XXXXXXXX            AVVLKTKP+L A+LK A+L CLDWSP + +LLLAGASDG
Sbjct:  823 KVSSFADWAKETGGGGGGARGCLPTAPVKVELVLQGAWDAAGIKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVPARRRVQIPPLEADVFSSGVPYNHGQPSPLPLVGKRTTGPALLQIWRAKDVCSVLT-----------------------PSRPPKP-------GTATTPXXXXXXXXXXXXXXXAKATTAAKDPPPETDNMPVKKLGRPTKATAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAAAEAAAKKXXXXXXXXXXXXXEAVVGG---SSMFELAYGIAHDGGGVVKCKWAPDGSAGGGG------------------DGGALGLPPAGVSGGSLPVYVCPDPDGVTAEAASSLSNTAPGSGASGGTAGAFAPPGSTPAAXXXXXXXXH----------GAVVLKTKPILQARLKHAELMCLDWSPQEPDLLLAGASDG 1236          
BLAST of mRNA_H-canaliculatus_F_contig10240.255.1 vs. uniprot
Match: A0A6H5JCY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY4_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 4.170e-26
Identity = 92/182 (50.55%), Postives = 104/182 (57.14%), Query Frame = 0
Query:  238 AAPEVVGGGDEDSGLFELAYAIAHDGGGVVKCRWAPDGSSDRGVGVDAAXXXXXXXXXXXREDSEALGLLAAIFYDGSLRVYVCPDPDEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAVVLKTKPVLHAQLKQAQLQCLDWSPHDANLLLAGASD 419
            A   +VGGG     +FELAY IAHDGGGVVKC+W PDG    G G +               +  ALGLLAA+F DGSLRVYVCPDPD V                  XXXXXXXXXXXXXXX                     AVVLKTKP+LHA+LK A++ CLDWSP + +LLLAGASD
Sbjct:  694 AEEAIVGGGS----MFELAYGIAHDGGGVVKCKWGPDG----GAGGEG--------------EGGALGLLAAVFQDGSLRVYVCPDPDGVTAEAASSLSNTTPGASAPXXXXXXXXXXXXXXXH-------------------GAVVLKTKPILHARLKHAEVMCLDWSPQEPDLLLAGASD 834          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10240.255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDG0_ECTSI8.610e-4135.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCY4_9PHAE4.170e-2650.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15052RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNITcoord: 180..420
NoneNo IPR availablePANTHERPTHR15052:SF2GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 2coord: 180..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10240contigH-canaliculatus_F_contig10240:1..4151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10240.255.1mRNA_H-canaliculatus_F_contig10240.255.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10240 1..4151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10240.255.1 ID=prot_H-canaliculatus_F_contig10240.255.1|Name=mRNA_H-canaliculatus_F_contig10240.255.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=420bp
AAPSPPSQKKTSTLSDWAKETGGGGGSVRGRLPPVPVKVEVVSRADWDPA
GIRPKSMKEEDAAGTKGAAAAGPVRERVQIPPLQADVFASAMPYGRGRQS
PLPLVGSRTSGPGLLQQPLCVPLSLSLSFSFVVLDGNTPLWSRVLPPPSL
PSEAFPFFWRGGDATGARAHTHTHTHMRTHSCTPAASTLRNASTKLASSS
PSKCTKPNAAAAGSAAGSATKEIERPTKEGAAAAASVAAPEVVGGGDEDS
GLFELAYAIAHDGGGVVKCRWAPDGSSDRGVGVDAAAAAAAAGGGGGRED
SEALGLLAAIFYDGSLRVYVCPDPDEVAAAAATAKRASGASTTTTAAAAT
AGAPTPTGKRVGQASGHGSAGGGSGSGGGPAAVVLKTKPVLHAQLKQAQL
QCLDWSPHDANLLLAGASDG
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