prot_H-canaliculatus_F_contig1016.184.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1016.184.1
Unique Nameprot_H-canaliculatus_F_contig1016.184.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length465
Homology
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.210e-61
Identity = 338/474 (71.31%), Postives = 353/474 (74.47%), Query Frame = 0
Query:    2 ALAASLEDLPASALHPVLHAFLLECGLSTTAAALREETGKSSKKLAKARTSLGAGCQDLLEIVNAHRRRHAVAAAD---NEVEEDVEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVPKLLTPSKDVDAAASNGVANG-GMKTPVKGGDSGDKANGDS------TGKKSTG-KSRTQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 464
            A AA++EDLPASALHP++H+FLLECGLS TAAALREETGKSSKKL K + +LG GC+DLLEIVNAHR+R A  AA    ++V+ED+EH     XXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                   WVPK LTP+K      SNGVANG GMKTP KGG                TGKKSTG KSRTQGEAFKRVQD+QWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:    5 AAAAAVEDLPASALHPLVHSFLLECGLSATAAALREETGKSSKKLGKQQAALGGGCKDLLEIVNAHRKRLAAEAAKAGGDDVQEDMEHTKKESXXXXXXXXKGKANGVKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------WVPKALTPNKAGXXGDSNGVANGDGMKTPAKGGXXXXXXXXXXXXXXXXTGKKSTGGKSRTQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 411          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 1.510e-53
Identity = 114/144 (79.17%), Postives = 117/144 (81.25%), Query Frame = 0
Query:  329 AWVPKLLTPSKDVDAAASNGVANG-GMKTPVKGGDSGDKANGDST------GKKSTG-KSRTQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 464
            AWVPK LTP+K      SNGVANG GMKTP KGG                 GKKSTG KSR+QGEAFKRVQD+QWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG
Sbjct:  378 AWVPKDLTPNK-AGGGVSNGVANGDGMKTPAKGGQGXXXXXXXXXXXXXXXGKKSTGGKSRSQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSDG 520          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A7S3Y1Y8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y8_HETAK)

HSP 1 Score: 103 bits (258), Expect = 1.020e-21
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 0
Query:  374 KKSTGKSRTQGEAFKRVQDDQWVGGLKK-GFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 463
            KK+    R QGEAFKRV  D W   +K     DN+YEGTFG  GYG KASE L KVRGKDFRHEKTKKKRG+YRGG+I++ S S+KF +SD
Sbjct:  151 KKTPRSERVQGEAFKRVCSDTWGSAIKHDALKDNSYEGTFGGDGYGAKASEVLLKVRGKDFRHEKTKKKRGNYRGGQITLASNSIKFANSD 241          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A150FVM7_GONPE (SRP40_C domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FVM7_GONPE)

HSP 1 Score: 103 bits (258), Expect = 1.210e-20
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0
Query:  361 GDSGDKANGDSTGKKSTGKSRTQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 463
            G+ G  ANG  +GK   GK  T  +AF+RV+ ++W+G  KKG  DN+YEGTFGQGG+GFKA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:  294 GEXGKTANGKQSGK--NGKPTTAAKAFQRVKAEEWLG--KKGAIDNSYEGTFGQGGWGFKAQQVLGAVRGKDFRHEKTKKKRGSYRGGAIDPHATFSTKFESDD 393          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A4D9D037_9STRA (SRP40_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D037_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.890e-20
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0
Query:  381 RTQGEAFKRVQDDQWVGGLKKG-FDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFD 460
            R  GEAF+RV D+ W   +K     DN+Y GTFG GGYG KASEKL  VRGKDFRHEKTKKKRGSYRGG IS+ S+S+K+D
Sbjct:  391 RVSGEAFRRVDDEYWGQQIKDDRLKDNSYAGTFGSGGYGAKASEKLMTVRGKDFRHEKTKKKRGSYRGGTISLESHSIKYD 471          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A836CH62_9STRA (SRP40, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH62_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.460e-20
Identity = 67/133 (50.38%), Postives = 76/133 (57.14%), Query Frame = 0
Query:  329 AWVPKLLTPSKDVDAAASNGVANGGMKTPVKGGDSGDKANGDSTGKKSTGKSRTQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDD 461
            AW P   TP     AAA+        KTP   G SG                   GEAF+RV+D++WV  L  G D N YE TFGQ GYG+KA + L  VRGKDFRHEKTKKKRGSYRGG I+M S S KFD+
Sbjct:  418 AWTPSAKTPEVKQPAAAA--------KTP---GSSG-------------------GEAFRRVKDEEWVDKLANGTDTNHYEDTFGQDGYGYKAHQVLINVRGKDFRHEKTKKKRGSYRGGTITMASNSFKFDE 520          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A061RD47_9CHLO (SRP40_C domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD47_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.840e-20
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0
Query:  382 TQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 463
            T  +AF+RV++++W+G  KKG  DN+Y GTFG  G+G+KA E L KVRGKDFRHEKTKKKRGSYRGG+I + S S KF+  D
Sbjct:  201 TAXKAFQRVREEEWIG--KKGSWDNSYTGTFGAQGWGYKAQEVLGKVRGKDFRHEKTKKKRGSYRGGKIELGSNSFKFESDD 280          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A8JCQ6_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JCQ6_CHLRE)

HSP 1 Score: 94.4 bits (233), Expect = 1.090e-19
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0
Query:  382 TQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNS-YSVKFDDSD 463
            T G+AF+RV+ ++W+G  KKG  DN YE TFGQ G+G+KA + L  VRGKDFRHEKTKKKRGSYRGG I  ++ +S KF+  D
Sbjct:   34 TAGKAFQRVKAEEWLG--KKGAIDNRYEATFGQAGWGYKAQQVLGAVRGKDFRHEKTKKKRGSYRGGNIDPHATFSTKFESDD 114          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A7S1T5X8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5X8_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 3.730e-19
Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 0
Query:  382 TQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEI-SMNSYSVKFDDSD 463
            T  +AF+RV++++W+G  KKG  DN+Y GTFGQ G+G+KA E L KVRGKDFRHEKTKKKRG+Y+GG+I +M S S+KF+  D
Sbjct:  208 TAAKAFQRVKEEEWLG--KKGAWDNSYVGTFGQDGWGYKAQEVLGKVRGKDFRHEKTKKKRGTYKGGKIDNMGSNSIKFESDD 288          
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Match: A0A7S3QVY0_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QVY0_DUNTE)

HSP 1 Score: 99.4 bits (246), Expect = 4.010e-19
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 0
Query:  360 GGDSGDKANGDSTGKKSTGKSRTQGEAFKRVQDDQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 463
            GG   DK  G+ST K           AF+RV+ ++W+G  KKG  DN+YEGTFGQ G+GFKA + L  VRGKDFRHEKTKKKRG+YRGG I  +S+S KFD  D
Sbjct:  290 GGSDSDKKKGNSTFK-----------AFQRVKAEEWLG--KKGAWDNSYEGTFGQDGWGFKAQQALGAVRGKDFRHEKTKKKRGTYRGGVIDGSSHSYKFDSDD 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1016.184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH06_ECTSI1.210e-6171.31LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JYW0_9PHAE1.510e-5379.17LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3Y1Y8_HETAK1.020e-2163.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A150FVM7_GONPE1.210e-2058.65SRP40_C domain-containing protein n=1 Tax=Gonium p... [more]
A0A4D9D037_9STRA1.890e-2066.67SRP40_C domain-containing protein n=1 Tax=Nannochl... [more]
A0A836CH62_9STRA2.460e-2050.38SRP40, C-terminal domain-containing protein n=1 Ta... [more]
A0A061RD47_9CHLO6.840e-2062.20SRP40_C domain-containing protein n=1 Tax=Tetrasel... [more]
A8JCQ6_CHLRE1.090e-1960.24Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A7S1T5X8_9CHLO3.730e-1961.45Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S3QVY0_DUNTE4.010e-1956.73Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
IPR007718Srp40, C-terminalPFAMPF05022SRP40_Ccoord: 387..459
e-value: 1.3E-24
score: 86.9
IPR039191Srp40/Nopp140PANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 133..462
coord: 11..327
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 11..43
score: 8.447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1016contigH-canaliculatus_F_contig1016:6787..12403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1016.184.1mRNA_H-canaliculatus_F_contig1016.184.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1016 6604..13635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1016.184.1 ID=prot_H-canaliculatus_F_contig1016.184.1|Name=mRNA_H-canaliculatus_F_contig1016.184.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=465bp
MALAASLEDLPASALHPVLHAFLLECGLSTTAAALREETGKSSKKLAKAR
TSLGAGCQDLLEIVNAHRRRHAVAAADNEVEEDVEHAKKVKKAKAAAAAA
AAVVASSSSSSSSSSSSSSSSSSSSSSSSEEEDSDDDKSEEEEEEEEEEE
KPEANVKTSKKSKKAAAAAAEAAEAAAAAESSSDEESEESSDGEEEEVKE
GEKQEENRPKKRKAAAVEADSSSDQDDSDSDEEEEEEEEEDEAKKPPAKK
KKKVEPAAAAAATAAASDSDSSSSSSSSSSSDSSSDSDSSDDSSSSDDET
DEEQEAKRAVVKASAEKERRRSSAAAAAAWVPKLLTPSKDVDAAASNGVA
NGGMKTPVKGGDSGDKANGDSTGKKSTGKSRTQGEAFKRVQDDQWVGGLK
KGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEI
SMNSYSVKFDDSDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH
IPR039191Srp40/Nopp140
IPR007718Srp40_C