prot_H-canaliculatus_F_contig10157.180.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10157.180.1
Unique Nameprot_H-canaliculatus_F_contig10157.180.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length260
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.830e-35
Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 0 
Query:  126 QVFSGTIVGAIRKCQADRERRGQHRDLALEGYEELASMIDLFVDIFNGNYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDIL-HFDGWREVLQELSPPTGAGTSNWKKHFITRES 240
            +V SGTIV AIR+ +A++E RG+  DLAL  YE LA  ++ FVDIFNG+Y RT+ ERR  I+K KGYVTSAEDPIL+RL++IL +FD W ++LQE  PPTG G   WKKHFITR S
Sbjct:  796 KVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS 911
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BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 9.330e-27
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 0 
Query:  118 SPYPRSPTQVFSGTIVGAIRKCQADRERRGQHRDLALEGYEELASMIDLFVDIFNGNYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDILHF-DGWREVLQELSPPTGAGTS-NWKKHFITRESWHDLRACALGFLSTSRYLF 259
            SP+     QV SG I+ AI        R G     A E Y+ LA  ++ FVDIFNGNY R++++R+ G  K  G + S E   + RL++IL F D W+  L+    P+G G    WKKHFIT +SW DLR   LGF+S  RYLF
Sbjct:   15 SPFSHGVVQVVSGMIIDAIADYMEANGRNG-----AAECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLF 153
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 4.170e-8
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:  170 IFNGNYDRTQLERRTGIHKRKGYVTSAEDPILKRLVDIL-HFDGWREVLQ 218
            +  G+Y RT+ ERR  I+K KGYVTSA+DPIL+RLV+IL +FD W +++Q
Sbjct:  188 VHTGDYGRTKFERRAQINKMKGYVTSADDPILERLVEILRYFDDWNDMMQ 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10157.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZI2_ECTSI1.830e-3562.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5I6_9PHAE9.330e-2743.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6I9_9PHAE4.170e-858.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..259
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.707
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10157contigH-canaliculatus_F_contig10157:3369..4324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10157.180.1mRNA_H-canaliculatus_F_contig10157.180.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10157 88..5020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10157.180.1 ID=prot_H-canaliculatus_F_contig10157.180.1|Name=mRNA_H-canaliculatus_F_contig10157.180.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=260bp
MSRYLRGWCTALSLYLCLGHFFCVSHLCARKSIVPVPPPRVFMLVKSHVF
VRTSTGTCFLVIQPQQHSELTFPYIEAGAIALARGQASHLGLARTKCGPN
RLLPWSHLTWLLVPLKPSPYPRSPTQVFSGTIVGAIRKCQADRERRGQHR
DLALEGYEELASMIDLFVDIFNGNYDRTQLERRTGIHKRKGYVTSAEDPI
LKRLVDILHFDGWREVLQELSPPTGAGTSNWKKHFITRESWHDLRACALG
FLSTSRYLF*
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