prot_H-canaliculatus_F_contig10151.174.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10151.174.1
Unique Nameprot_H-canaliculatus_F_contig10151.174.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length105
Homology
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 2.230e-55
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            NPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITG L
Sbjct: 1122 NPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSL 1226          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.750e-55
Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            NPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAK+LVKGLVGGTFGSAAKITG L
Sbjct: 2783 NPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSL 2887          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.280e-29
Identity = 68/132 (51.52%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTFVFDEL+VTHY GS   L+  +   + QQ VAQGYK                           VVGSMELLGDPL+LV+KL DSV QF   T+AE  G+  T GAGA++LV G+VGG FGSAAKI G L
Sbjct:  320 SPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSL 451          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.840e-27
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITG 103
            NPTF F+EL +    G    L+  +  ++ +Q VAQGYKVVGSMELLGDP+SLVS +G  V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG
Sbjct:  274 NPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITG 376          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.840e-23
Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    3 TFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            T VF+EL+ THY GS   L  +VV ++ QQA+ Q YK++G+M+LLG+PL+L    G  V +FF +T+AE+ GDAD+ G G + L K ++GG F S +KITG +
Sbjct: 3988 TLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTV 4090          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A2P4WYB2_9STRA (Vacuolar protein sorting-associated protein 13a n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYB2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.370e-17
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITG L
Sbjct:  169 SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSL 273          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: W2QD77_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QD77_PHYPN)

HSP 1 Score: 85.1 bits (209), Expect = 4.600e-17
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITG L
Sbjct: 2310 SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSL 2414          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: G5AC94_PHYSP (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AC94_PHYSP)

HSP 1 Score: 85.1 bits (209), Expect = 4.600e-17
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITG L
Sbjct: 2309 SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSL 2413          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A8J5IR68_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IR68_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.620e-17
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITG L
Sbjct: 2309 SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSL 2413          
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Match: A0A3F2RF94_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RF94_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.280e-17
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    1 NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGEL 105
            +PTF F E+V+     +   L   +V    QQ V Q Y+++GS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITG L
Sbjct: 2275 SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSL 2379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10151.174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C7_ECTSI2.230e-5594.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWU7_9PHAE5.750e-5593.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJU6_9STRA7.280e-2951.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GN42_9STRA6.840e-2757.28Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
W7U3K2_9STRA2.840e-2348.54Ph domain containing protein n=4 Tax=Monodopsidace... [more]
A0A2P4WYB2_9STRA4.370e-1743.81Vacuolar protein sorting-associated protein 13a n=... [more]
W2QD77_PHYPN4.600e-1743.81Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
G5AC94_PHYSP4.600e-1743.81Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A8J5IR68_9STRA4.620e-1743.81Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A3F2RF94_9STRA6.280e-1742.86Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 6..104
e-value: 1.9E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 4..103
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 4..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10151contigH-canaliculatus_F_contig10151:3467..4177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10151.174.1mRNA_H-canaliculatus_F_contig10151.174.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10151 3467..4177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10151.174.1 ID=prot_H-canaliculatus_F_contig10151.174.1|Name=mRNA_H-canaliculatus_F_contig10151.174.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=105bp
NPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDP
LSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAK
ITGEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026847VPS13
IPR031645VPS13_C