prot_H-canaliculatus_F_contig10099.124.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig10099.124.1
Unique Name	prot_H-canaliculatus_F_contig10099.124.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	137

Homology

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BLAST of mRNA_H-canaliculatus_F_contig10099.124.1 vs. uniprot
Match: D7FIE4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 6.490e-25
Identity = 66/130 (50.77%), Postives = 76/130 (58.46%), Query Frame = 0

Query:    7 AVLSVLVVECFVDRAWEARAGVVGGGSXXXXXXXXXXAFLSGAEGEGMAAATGAAVRGGGEEWARWLGDGGIAGGVSFRRHDCDTEWCYSRSLLGLWEWLLLFLEAGFCIALRHDLAPATGGIGVESFVL 136
            AVLSVL+VEC     W     + GG            AF+ G         + + V G  +E A           VS  R DCDTEWCYSRSLLGLWE+LLL +EAGFC+ALRHDLAPATGG+GVESFVL
Sbjct:  221 AVLSVLIVECVEGGTWNMGWSIRGGAG----------AFVGGG-------GSSSGVGGFDDETAAVGDQDRWEDNVSSSR-DCDTEWCYSRSLLGLWEYLLLAVEAGFCMALRHDLAPATGGVGVESFVL 332

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10099.124.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10099.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
D7FIE4_ECTSI	6.490e-25	50.77	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29

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x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..136
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.676

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig10099	contig	H-canaliculatus_F_contig10099:257..667 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig10099.124.1	mRNA_H-canaliculatus_F_contig10099.124.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig10099 182..2234 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig10099.124.1 ID=prot_H-canaliculatus_F_contig10099.124.1|Name=mRNA_H-canaliculatus_F_contig10099.124.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp
MATALAAVLSVLVVECFVDRAWEARAGVVGGGSGSGSGSLSASAFLSGAE
GEGMAAATGAAVRGGGEEWARWLGDGGIAGGVSFRRHDCDTEWCYSRSLL
GLWEWLLLFLEAGFCIALRHDLAPATGGIGVESFVL*