prot_H-canaliculatus_F_contig1008.108.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1008.108.1
Unique Nameprot_H-canaliculatus_F_contig1008.108.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length99
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1008.108.1 vs. uniprot
Match: A0A6H5KYM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM5_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.120e-40
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0 
Query:   15 MMLVGMADIVVTSPRSSFSALASASGGESTQRFGGISCNPLVNDPEFHSLECAKNEWRVDQVGNPKQWDAVYHLVDSNAKRCKG 98
            MMLVG ADI VTSPRSS+SALA+A GG STQR+GGISC   VN+PEFH LECAKNEW+VDQV NP +WD +YHLV+SN  RCKG
Sbjct:    1 MMLVGNADIAVTSPRSSYSALAAARGGSSTQRYGGISCTEQVNEPEFHCLECAKNEWKVDQVKNPTEWDNIYHLVESNRARCKG 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1008.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYM5_9PHAE4.120e-4075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1008contigH-canaliculatus_F_contig1008:3323..5441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1008.108.1mRNA_H-canaliculatus_F_contig1008.108.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1008 3145..5525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1008.108.1 ID=prot_H-canaliculatus_F_contig1008.108.1|Name=mRNA_H-canaliculatus_F_contig1008.108.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=99bp
MRNTLEKIKSALTEMMLVGMADIVVTSPRSSFSALASASGGESTQRFGGI
SCNPLVNDPEFHSLECAKNEWRVDQVGNPKQWDAVYHLVDSNAKRCKG*
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