prot_H-canaliculatus_F_contig10079.107.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10079.107.1
Unique Nameprot_H-canaliculatus_F_contig10079.107.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length265
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10079.107.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 6.330e-40
Identity = 115/166 (69.28%), Postives = 123/166 (74.10%), Query Frame = 0 
Query:   11 GRAIGEDTMLWVTETDLGG--GIQRTLLQKRVGEFDGREGQDAIPHWVMACVLHGEFHTKEQPKVAFFLAPWVPPERNS---LPAPSSTSRXXXXXXXXXXXXXGG-DAGRPASFREPXXXXXXXXXXXXXXXX--------------SQVSQRFTAPAQMLVSKV 156
            GRAIG+DTMLWVTE DLGG  GIQRTLLQKRVGEFDGREGQDAIP+WVMACVLHGEFHTKEQ K+AFFLAPW+PPER     L  PS+  R       XXXXXX   DA +PAS    XXXXXXXXXXXXXXXX              +Q+SQRFTAP QMLVSKV
Sbjct:  983 GRAIGDDTMLWVTEMDLGGHGGIQRTLLQKRVGEFDGREGQDAIPNWVMACVLHGEFHTKEQDKMAFFLAPWIPPERGGGGGLSLPSTPHRQPQGKRGXXXXXXXXXDARKPASLXXXXXXXXXXXXXXXXXXXXXXXXXVGAGGVPSNQMSQRFTAPVQMLVSKV 1148
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10079.107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE6.330e-4069.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021772WDR48/Bun107PFAMPF11816DUF3337coord: 16..255
e-value: 8.4E-18
score: 64.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10079contigH-canaliculatus_F_contig10079:2142..5104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10079.107.1mRNA_H-canaliculatus_F_contig10079.107.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10079 2142..5104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10079.107.1 ID=prot_H-canaliculatus_F_contig10079.107.1|Name=mRNA_H-canaliculatus_F_contig10079.107.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=265bp
ERGGGGGGGNGRAIGEDTMLWVTETDLGGGIQRTLLQKRVGEFDGREGQD
AIPHWVMACVLHGEFHTKEQPKVAFFLAPWVPPERNSLPAPSSTSRQQQA
RRGGGGGGAGGDAGRPASFREPRGGVGGSAAGGGGVPASQVSQRFTAPAQ
MLVSKVMAYVLSHEDLRQHLESTVVEEHPAEGENGPATASGDGGGGGGRR
GGGAGRVPGPSREAPEDLVEVLCGDRVVEPHLYIGAIQQHIWNPKASGTL
FLHYRSRRRTAVER*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021772WDR48/Bun107