prot_H-canaliculatus_F_contig10.21.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig10.21.1
Unique Name	prot_H-canaliculatus_F_contig10.21.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	782

Homology

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BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Match: A0A6H5JZN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN1_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 9.220e-91
Identity = 251/414 (60.63%), Postives = 281/414 (67.87%), Query Frame = 0

Query:  383 LALEGGGLPMSTTLYNFAIXXXXXXXXXXXXXXXXERMKNNPATPPDARTYSCLINACAKDANLEDALAYLTEMRAVGLAPTIFAYVSAMNAAKMANCWRXXXXXXXXXXXXXXXXXXXSFNNVVDAFGKDGQLARSLVQPHVDGDVQGSGNGRQEAAVPSNEVGSHVDPNAWQLEESSQLVKRMENNGIRPDVMSFNVLIDACAR-------------------GGRHWNASXXXXXXXXXXXXXXXXXXXXXXXXCRAATGDEWQIALDXXXXXXXXXXXXXXXXXXXXXGACVKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIRADPTLEPNQRTYTAVINCFQQFQGGQAVASLASTLAEFSSREEILLNPMPTSDVYLGSSLYPVEDGD 777
            LA  G G+PMSTT+YNF I                ERMK+NPATPPDA+TY+ LI+ACAKDANLEDALAYLTEMRAVGLAPT FAY+SAM+A K+A  W+                   SF NVVDA+GKDGQLAR+LVQ +         N  + AA   NE+ S  D NAW+ EE  +LVKRMENNG+  DVMSFN+LIDACAR                   GG HW A+                        CR  T +EW++ALD XXXXXXXXXXXXXXXXXXXX    KAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK+RADPTLE NQRTYT+ INCFQQFQGGQ+VASLASTLA  SSREE+LL+P+PTSDVYLG S    E G+
Sbjct:   77 LAQRGEGVPMSTTMYNFGIDAGVALL---------ERMKSNPATPPDAQTYAYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTNA--------NPTEIAADSENEMRSDADLNAWRAEEPDELVKRMENNGVELDVMSFNILIDACARYTAHRVPLPLPMSHVPFRKGGSHWAAARLLKKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLDPIPTSDVYLGGSSGTPEGGE 473

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BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Match: D7G0G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G1_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 8.020e-85
Identity = 484/653 (74.12%), Postives = 521/653 (79.79%), Query Frame = 0

Query:  125 FRKKVRVKKKSKRTMRSLRYNAFIRSAKELGPRGQWREVLRLLDKLAEDGIPLNSYTYNSAMSSIAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVLALEGGGLPMSTTLYNFAIXXXXXXXXXXXXXXXXERMKNNPATPPDARTYSCLINACAKDANLEDALAYLTEMRAVGLAPTIFAYVSAMNAAKMANCWRXXXXXXXXXXXXXXXXXXXSFNNVVDAFGKDGQLARSLVQPHVDGDVQGSGNGRQEAAVPSNEVGSHVDPNAWQLEESSQLVKRMENNGIRPDVMSFNVLIDACARGGRHWNASXXXXXXXXXXXXXXXXXXXXXXXXCRAATGDEWQIALDXXXXXXXXXXXXXXXXXXXXXGACVKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIRADPTLEPNQRTYTAVINCFQQFQGGQAVASLASTLAEFSSREEILLNPMPTSDVYLGSSLYPVEDGD 777
            FR+K+RV+K SKR  R+ R+N+FI +AK  G RGQWREVLRLLDK+AEDGIPLNSY YNSA+SSIAK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LAL G G+PMSTT+YNF IXXXXXXXXXXXXXXXX RMK+NPATPPDA+T                       MRAVGLAPT FAY+SAM+A K+A  W+                   SF NVVDA+GKDGQLAR+LVQ         S N  + AA   NE+ S  D NAW+ E+  +LVKRMENNG+  DVMSFN+LIDACARGG HW A+                        CR  T +EW++ALD XXXXXXXXXXXXXXXXXXXX    KAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK+RADPTLE NQRTYT+ INCFQQFQGGQ+VASLASTLA  SSREE+LLNP+PTSDVYLG S    E G+
Sbjct:    4 FRRKIRVRKVSKRIARTTRHNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALGGEGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTXXXXXXXXXXXXXXXXXXXXXXXMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQT--------SANPTEIAADSENEMRSDADLNAWRAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPGTPEGGE 648

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2

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POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JZN1_9PHAE	9.220e-91	60.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0G1_ECTSI	8.020e-85	74.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 467..495 e-value: 0.67 score: 10.3 coord: 358..381 e-value: 0.44 score: 10.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 320..354 e-value: 1.3E-7 score: 29.4 coord: 432..464 e-value: 2.4E-6 score: 25.3 coord: 650..683 e-value: 6.9E-7 score: 27.1 coord: 180..213 e-value: 4.7E-6 score: 24.4 coord: 397..422 e-value: 0.0019 score: 16.2 coord: 285..319 e-value: 7.3E-8 score: 30.1 coord: 250..283 e-value: 7.8E-6 score: 23.8 coord: 215..249 e-value: 1.9E-7 score: 28.9 coord: 578..611 e-value: 7.2E-5 score: 20.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 563..621 e-value: 1.8E-13 score: 50.3 coord: 635..694 e-value: 2.2E-11 score: 43.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 394..442 e-value: 4.8E-8 score: 33.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 11.542
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 538..574 score: 5.174
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..282 score: 11.509
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 318..352 score: 12.299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 647..681 score: 11.279
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 610..646 score: 10.687
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 283..317 score: 11.674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 464..498 score: 8.78
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 575..609 score: 11.948
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 429..463 score: 11.444
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 11.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 393..427 score: 10.161
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 682..712 score: 8.703
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 7.64
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 140..177 score: 6.226
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 553..623 e-value: 7.0E-18 score: 66.6 coord: 113..265 e-value: 7.1E-30 score: 105.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 624..753 e-value: 4.7E-29 score: 103.7 coord: 266..386 e-value: 8.6E-35 score: 122.5 coord: 387..526 e-value: 2.0E-30 score: 108.2
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 182..335 e-value: 1.0E-15 score: 57.7
None	No IPR available	PANTHER	PTHR46128	FAMILY NOT NAMED	coord: 361..518 coord: 627..729 coord: 135..354 coord: 557..621 coord: 248..381