prot_H-canaliculatus_F_contig10.16.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10.16.1
Unique Nameprot_H-canaliculatus_F_contig10.16.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length155
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10.16.1 vs. uniprot
Match: D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.200e-5
Identity = 32/61 (52.46%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:   18 VDDEADRAVLNHIADMMVDLAAPSTPATAGTSTAMGKVD-GGGGDKLGDKAADHVMSLAGE 77
            VDD ADRA+LN IADM+VDLAA    +T  +  A G V  GGGG  L    AD  + L GE
Sbjct:  124 VDDSADRAILNQIADMVVDLAALVPQSTTASPAAPGDVSVGGGGTTLPQPGADQTLLLGGE 184
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G540_ECTSI5.200e-552.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10contigH-canaliculatus_F_contig10:38030..39557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10.16.1mRNA_H-canaliculatus_F_contig10.16.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10 38030..39557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10.16.1 ID=prot_H-canaliculatus_F_contig10.16.1|Name=mRNA_H-canaliculatus_F_contig10.16.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=155bp
TLLPLDAPPSRDHVQRKVDDEADRAVLNHIADMMVDLAAPSTPATAGTST
AMGKVDGGGGDKLGDKAADHVMSLAGESSLRKEVSIGNRDLPTSQISSQR
DTDDDDEDADGGANASDTDDSGSSDTGDSPEEAGEKALTGHHGQATSNDE
RYLV*
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