mRNA_H-canaliculatus_F_contig1538.3979.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1538.3979.1 vs. uniprot
Match: D7G205_ECTSI (HMMR_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G205_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 2.120e-133 Identity = 546/1057 (51.66%), Postives = 620/1057 (58.66%), Query Frame = 1
Query: 1 MALSWAQSKVDRFEEKTTGSSLGPGDYDPCLPKSQGLAGAVSLGFTSTKGPRAKDREEQIPEETEAILNAARDRTSVSAVSKRSTFGCAV---RPTLVVGASRLEKVKAEQHARQLAWAESERAKLQAEVKTLRSLQGSLAKSERQARSESATASKRAEVAERRAXXVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRREELASQVESLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEFSAVRDRADSLEARSALLEFELNARKGELQESEASHGGLREESAALRGERENLAVRVESLGGELAGAKVRLDRAAGDAESRARKLSEXXXXXXXXXXXXGRAEVELEASSSASLAVAESVAASLEERXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRILERTAADAAEDADSLRQRLGDALAEGVEYADQHTRVEEKLRSSEADCAALWEEREEAKERLCAAFVEGRELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGFATVSSEARVLKASAEDAKAEIARLNDLVAETKTRLTKSVDEEGRLGAELASSEARREAAAXXXXXXXXXXXXXXXDFVALQERLREAESTSERLRSGVVSTETELSQHLKASREGAAALEEAVAEALVGRGEAATRAARLEAEVARAAGERDALREAGAALRRNKEAAAAKAEEMSALNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMSAMMDGIVADHVAGSRTVEELTRGMADIQGIGAELGEKLISMISDRNATQGKLEVAEGALAVSAAYRRRLERDLGASESLVKDLRKKKEKSDRAIVDLRKARQAKSELEAATAEMAELRSLTEGMCRVQAEGGKAIREAGLAKRNVQRLAIENAALAGHNNNKQKIKHLQDLKKQSIRLQNETARQASDLALAVSVLEAVGVLQKETEAATTHAGVAEKDGRGRGRRPRLRRPSDANSVSPPRSHKTQGVG 3162
MA+SWAQSKVDRFEEK TGS+LGPGDYDPCLP+SQG+AGAVSLGFTSTKG DRE+ P TE +L+ + SK+ T C RP L VGASRLEKVKAEQ +QL E ER KLQ EVKTLRSLQG+LAKSER AR+ESA KRA+ AER+A V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX L A SA LE EL R EL+ESE + LR E+AAL A R L A +AE++A LSE G +LE S+ L XXXX S L+ A DA+SLRQRLGDALAEGVEYADQHTR EE+LRSSEADCAALWEEREEAK RLCAAFVEGR L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++RL + E L LASSE R A DFVAL+ RL EAE T ERLRSGV +TE E+S+ L AS AAAL E++AEA GRG AA RA RL++E A E ALRE G XXXXXXXXXXX + +++ + A H A + +L RG A GIGA LGEKLIS++ ++ QGKLE AEGAL+ S A R RL+ ++ A+ES V+ LR + ++S L+KA+ A S+LE A+AEM EL++ EGM R Q EG A+REAGLA RNVQRLA ENAAL GHNNNKQKIKHLQ+LKK+SIRLQNE ARQASDLALA++VLEAVGVL KE +T A VA++ GRG RR S ANS+SP R + + G
Sbjct: 2 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKG-MTLDREQNNPVTTEEVLSLP------APTSKQPTTTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKREEALLRDKDGLRAANDASEARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALSARLEAELVGRGEELRESEDGNAALRREAAALXXXXXXXAARAXXXXXXXXXXXRGLXXXAQEAEAKAAXLSEAEAKPGG-----GAVRQKLE-STKEILXXXXXXXXXXXXXXXXXERVAQRLARELGGAEKGLESARESVACLKGAVTQGAADAESLRQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEAKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKESRLAECAAREKGLSEYLASSEGLRGEAKAELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVEATELEMSEQLAASEVVAAALGESLAEAAEGRGAAAARADRLQSEADGVARECAALREEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEKEACLEKASVAADRHRAEATRREAEFVGLRRVLEDVEAGHSAKNGEGSKLGRGSAGTHGIGAALGEKLISVVEEKRDVQGKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDESRLECEALQKAKCAMSKLEEASAEMTELKASCEGMYRAQTEGSNALREAGLANRNVQRLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEAGTTST-AVVAKRRGRGL----HSRRSSGANSLSPARFKRLEAHG 1040
BLAST of mRNA_H-canaliculatus_F_contig1538.3979.1 vs. uniprot
Match: A0A6H5LMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMH6_9PHAE) HSP 1 Score: 278 bits (710), Expect = 2.010e-73 Identity = 485/991 (48.94%), Postives = 542/991 (54.69%), Query Frame = 1
Query: 1 MALSWAQSKVDRFEEKTTGSSLGPGDYDPCLPKSQGLAGAVSLGFTSTKGPRAKDREEQIPEETEAILNAARDRTSVSAVSKRSTFGCAV---RPTLVVGASRLEKVKAEQHARQLAWAESERAKLQAEVKTLRSLQGSLAKSERQARSESATASKRAEVAERRAXXVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRREELASQVESLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEFSAVRDRADSLEARSALLEFELNARKGELQESEASHGGLREESAALRGERENLAVRVESLGGELAGAKVRLDRAAGDAESRARKLSEXXXXXXXXXXXXGRAEVELEASSSASLAVAESVAASLEERXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRILERTAADAAEDADSLR---------------------------QRLGDALAEGVEYADQHTRVEEKLRSSEADCAALWEEREEAKERLCAAFVEGRELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSH----GFATVSSEARVLKASAEDAKAEIARLNDLVAETKTRLTKSVDEEGRLGAELASSEARREAAAXXXXXXXXXXXXXXXDFVALQERLREAESTSERLRSGVVSTETEL---SQHLKASREGAAALEEAVAEALVGRGEAATRAARLEAEVA-----------------------------------------------------------------------------RAAGERDALREAGAALRRNKEAAAAKAEEMSALNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMSAMMDG-------IVADHVAGSRTVEELTRGMADIQGIGAELGEKLISMISDRNATQGKLEVAEGALAVSAAYR 2610
MA+SWAQSKVDRFEEK TGS+LGPGDYDPCLP+SQG+AGAVSLGFTSTKG DRE+ P TE L+ + SK+ T C RP L VGASRLEKVKAEQ +QL E ER KLQ EVKTLRSLQG+LAKSER AR+ESA KRA+ AER+A V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX +RAD L A SA LE EL R EL+ESE + LR E AALRGE E LA R L ELA A+ L+ AA + XXXXXXXXXXXX SSSA + +++ XXXXXXXXXXXXXXXXXXXXXXXXXXX QRLGDALAEGVEYADQHTR EE+LRSSEADCAALWEEREE K RLCAAFVEGR L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ FAT SSEARVLKAS D AE++RL + ++RL + E L +LASSE R AA DFVAL+ RL EAE T ERLRSGV +TE E+ Q L+ + L+E +A A A++ R A ++ R E D + E AALR AAAA+ EE A+ E XXXX G + ADH A + +L RG+AD GIGA LGEKLIS++ ++ QGKLE AEGAL+ S A R
Sbjct: 1 MAVSWAQSKVDRFEEKITGSNLGPGDYDPCLPRSQGMAGAVSLGFTSTKGMAPLDREQNNPTTTEENLSVP------APTSKQPTSTCGFGRPRPALNVGASRLEKVKAEQQEKQLVRLEMEREKLQDEVKTLRSLQGALAKSERHARAESAKVVKRAQAAERKAATVIADAGRLEEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLRAANDVSEARLREAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXERADELTALSARLEVELVGRAEELRESEDGNAALRREVAALRGEGEALAARAGRLEAELADARRGLEGAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSARAELEKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGDALAEGVEYADQHTRAEERLRSSEADCAALWEEREEVKARLCAAFVEGRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKMTNMWVDWFATASSEARVLKASGADVNAEMSRLRAELEGKESRLAECAAREEGLREDLASSEGLRGAAKVELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVETTELEMFEARQDLEGALRTNTELQERIAAADGRLAAASSNLRRXXARLSETSAGXXXXXXXXXXXXXXXXXXXXXXXXYRDRQEEDAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLQAEADGVAEECAALREEGRAAAARCEEAEAVREGLERTVGELGSEVEGLRAAVVEKEACLEKASVAAEGHRXXXXXXXXXFVGLRRXXXDVEADHSAKNGEGSKLGRGLADTYGIGAALGEKLISLVEEKKDVQGKLEAAEGALSSSEADR 985
BLAST of mRNA_H-canaliculatus_F_contig1538.3979.1 vs. uniprot
Match: A0A6H5L3M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.440e-6 Identity = 68/188 (36.17%), Postives = 84/188 (44.68%), Query Frame = 1
Query: 3238 ATPRSKSKMPLVSLQDRLLAALDSAELPQPQRQAASKKSHXXXXXXSARS------------------RSSTLPWGISGTPTGCFPSIKCFGGAAAEGGDFGVEGGAGTTACEAEAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDEVAGSHLSDDAKRSGVRRAILADVKLRTDVRKALLDR 3747
ATPRSKS++P VSLQ+RLLAAL+SAELPQ QR+ K S XXXXX S ++ T+ +PT C K G G G G T E G++LS++ R VRRAILADV+LRT+VRKALLD+
Sbjct: 28 ATPRSKSQIPRVSLQERLLAALESAELPQIQRRGGEKSSXXXXXXKPCTSSAADKSRPQLQEQQQLQQKTQTVL-----SPTRCSHLSKPVGDVGRGGHAMGAVGEKVTAVAEPSGPR------------------------------KCGHERGAYLSNEIVRGDVRRAILADVQLRTEVRKALLDQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1538.3979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1538.3979.1 >prot_H-canaliculatus_F_contig1538.3979.1 ID=prot_H-canaliculatus_F_contig1538.3979.1|Name=mRNA_H-canaliculatus_F_contig1538.3979.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1267bp MALSWAQSKVDRFEEKTTGSSLGPGDYDPCLPKSQGLAGAVSLGFTSTKGback to top mRNA from alignment at H-canaliculatus_F_contig1538:8724..19457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1538.3979.1 ID=mRNA_H-canaliculatus_F_contig1538.3979.1|Name=mRNA_H-canaliculatus_F_contig1538.3979.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10734bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1538:8724..19457- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1538:8724..19457- >mRNA_H-canaliculatus_F_contig1538.3979.1 ID=mRNA_H-canaliculatus_F_contig1538.3979.1|Name=mRNA_H-canaliculatus_F_contig1538.3979.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=7602bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1538:8724..19457- (Hapterophycus canaliculatus Oshoro5f female)back to top |